Gene BMA1607 details

Gene Information

• Locus tag: BMA1607
• ID: 3089835
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia mallei ATCC 23344
• Kingdom: Bacteria
• Replicon accession: NC_006348
• Strand: -
• Start bp: 1669661
• End bp: 1671613
• Gene Length: 1953 bp
• Protein Length: 650 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 637562296
• Product: ABC transporter, periplasmic substrate-binding protein
• Protein accession: YP_103243
• Protein GI: 53724129
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG4166] ABC-type oligopeptide transport system, periplasmic component

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.00266452
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGATCG GTTCGCCCCG GGCCCGCCGG CCGCGATCGC CGCAACGCGC GGCGCCATCA 
AAACAGGCCG CGCGCGCCGC CGCGCCGCGA CAGGCGGCCC GCGCGCGCGC CGCGCTCGCG 
CGCTTCGCGC GCCGGGCGGC GGCGGGCGTC ACGCTCGCCT TCGTCGCGGT GCCCGCGGCG 
CACGCCGTCT ACGCGATCGC GCAGTACGGC GAGCCGAAGT ATCCGGCGGG CTTCGCGCAT 
TTCGACTACG TGAACCCCGA CGCGCCGAAG GGCGGCACGC TCGTGCTCGC GAACCCGAAC 
CGGCTCACGA CGTTCGACAA GTTCAATCCG TTCACGATGC GCGGCAACCC GGCGCCCGGA 
ATCGACCTGC TGTTCGAGAG CCTGACGACG GGCAGCGCCG ACGAGCCCGC CTCCGCGTAC 
GGCCTGCTCG CGGACGACAT CGCCGTCGCG CCGGACGGCC TGTCGGTCAC GTTCCATCTG 
AATCCGCGCG CGCGCTTCTC GAACGGAGAA CCCGTCACCG CGGCGGACGT CAAGTATTCG 
TTCGACACGC TGAAGAGCCC GAAGGCGGCG CCGCAATACC CGGCGTACTA CGCGGACATC 
GCGCGCGCGG TGATCGTCGA CGCGGCGACC GTGCGCTTCG AGTTTCGCCG CAAGAACCGC 
GAGCTGCCGC TGATCGCGGG CGGCATCCCG GTGTTCTCGC GCAAATGGGG CGTGCGCGCG 
GACGGCTCGC ACATCGCGTT CGACCAGATC GCGTTCGAGC AGCCGATCGG CAGCGGCCCG 
TACCTGATCG AGCGCTACGA CAGCGGGCGC ACGATCACGT ACCGGCGCAA TCCCGCCTAC 
TGGGGCGCGG CGCTGCCCGT GCGGATCGGC ACGAACAACT TCGAGCGCAT CGTCTACAAG 
CTGTACGGCG ACGGCGTCGC GCGGCTCGAG GCGTTCAAGG CCGGCGAATA CGACGTGCTC 
GTCGAGTACA TCGCGCGCAA CTGGGCGCGG CGCGACGTCG GCAAGCGCTT CGACAGCGGC 
GAGCTCGTCA AGCGCGAGTT CCGCCAGCAC AACGGCGCGG GAATGCAGGG CTTCTTCATG 
AACCTGCGCC GGCCGCTGTT CCAGGACGTG CGCGTGCGCC ACGCGCTCGA TCTCGCGTTC 
GATTTCGAAT GGCTGAACCG GCAGCTCTTC TATGGCGCGT ACACGCGCCT GAACAGCTAT 
TTCGCCGATA CCGACCTGCA GGCGACGGGC ACGCCGAGCG CGGGCGAGCT CGCGCTGCTC 
GCCCCGTTGC GCGCGCAGCT CGACCCGGCC GTGTTCGGGC CGATGACCGT GCAGCCGAGC 
ACCGATTTGC CCGCGTCGCT GCGCGCGAAC CTGCTGAAGG CGCGCGCGCT GCTCGCCGAG 
GCCGGCTGGA CCTACCGCGA CGGCGCGCTG CGCAACGCGA AGGGCGAGCC GTTCGTGTTC 
GAGATTCTCG ACGATTCGGG CTCGGCGTTC GAGCCGGTGG TCGCCGCGTA CATCCGCAAT 
CTCGCGAAGC TCGGGATCGT CGTGAAGTAC CGGACGGCCG ATTTCGCGCT GCTGCAAAAG 
CGCCTCGACG CGTTCGACTA CGACATGACG ACGGTCCGCT ACCCGGGCGT CCAGGTGCCG 
GGCGCCGAGC AGGTCGCACG CTTCGCGAGC CGCTATGCGG ACGAGCCGGG CTCGGACAAC 
CTGACGGGGC TCAAGTCGCC CGCGGTCGAC GCGATCCTGA AGGCGCTCAC GCAGGCCGAG 
ACGCGCGACG AACTGCTCGA CGCGACGCAC GCGCTCGACC GCGTGCTGAT GCACGGCTAC 
TATGCGGTGC CGCAGTGGTA CAGCGCCGTG CACCGGATCG CGTTCAAGCG CACGCTCGCC 
TACCCGTCGG TGCTGCCGCT GTACTATTCG GCGGAAGGCT GGGTCGCCTC GACGTGGTGG 
GCGAGGCCCG AGCATGGCGC GTCCGCGCGT TAG 

 

Protein sequence

MTIGSPRARR PRSPQRAAPS KQAARAAAPR QAARARAALA RFARRAAAGV TLAFVAVPAA 
HAVYAIAQYG EPKYPAGFAH FDYVNPDAPK GGTLVLANPN RLTTFDKFNP FTMRGNPAPG 
IDLLFESLTT GSADEPASAY GLLADDIAVA PDGLSVTFHL NPRARFSNGE PVTAADVKYS 
FDTLKSPKAA PQYPAYYADI ARAVIVDAAT VRFEFRRKNR ELPLIAGGIP VFSRKWGVRA 
DGSHIAFDQI AFEQPIGSGP YLIERYDSGR TITYRRNPAY WGAALPVRIG TNNFERIVYK 
LYGDGVARLE AFKAGEYDVL VEYIARNWAR RDVGKRFDSG ELVKREFRQH NGAGMQGFFM 
NLRRPLFQDV RVRHALDLAF DFEWLNRQLF YGAYTRLNSY FADTDLQATG TPSAGELALL 
APLRAQLDPA VFGPMTVQPS TDLPASLRAN LLKARALLAE AGWTYRDGAL RNAKGEPFVF 
EILDDSGSAF EPVVAAYIRN LAKLGIVVKY RTADFALLQK RLDAFDYDMT TVRYPGVQVP 
GAEQVARFAS RYADEPGSDN LTGLKSPAVD AILKALTQAE TRDELLDATH ALDRVLMHGY 
YAVPQWYSAV HRIAFKRTLA YPSVLPLYYS AEGWVASTWW ARPEHGASAR