Gene BMA1605 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMA1605 
Symbol 
ID3089536 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei ATCC 23344 
KingdomBacteria 
Replicon accessionNC_006348 
Strand- 
Start bp1667333 
End bp1668430 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content68% 
IMG OID637562295 
ProductABC transporter, permease protein 
Protein accessionYP_103242 
Protein GI53724127 
COG category[R] General function prediction only 
COG ID[COG4239] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.0000276043 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGCCGAC TCGCCGTCTC TTCCAGGATC GACGCCGCGC GCGCGCGGGT ATCGCCGTCG 
CCCGCGCGGC GCGTGTGGCT GCGCTTCAAG GCGCAGCGCC TCGGCTACTG GAGCCTCGTG 
ATCTTCGCGA TCGCGTTCGC CGCGAGCCTG GCCGCGCCGC TGTGGTCGAA CGACAAGCCG 
CTCGTCGTGC GCTACGACGG CCAGTTCTAT TTCCCGCTCT TCAAGAGCTA CCCGGAAACG 
ACCTTCGGCG GCGATTTTCC GACGCCCGCC GACTATCTCG ATCCGTACGT GCGCGGCAAG 
CTCGACGCGC CGGGCAACTT CGTGCTGTAT CCGCCGAACC GCTATTACTA CGACACGCTC 
AACTACTTCT CGAAGCGCCC GAACCCGGCG CCGCCGTCGC GCGAGAACTG GCTCGGCACC 
GACGCGCAAG GGCGCGACCT GCTCGCGCGG CTCGTCTACG GCTTTCGCGA GTCGGTCGAG 
TTCGCGCTGA TCCTGACGTT CATCGGCACG CTGCTCGGCA TCGCGGCGGG CGCGGTGCAG 
GGGTTCTTCG GCGGGCGCAT CGACATCGTC GGCCAGCGGC TCATCGAAAT CTGGAGCTCG 
ATGCCCGAGC TGTATCTGCT GATCATCTTC GCGTCCGTGT TCGAGCCGAG CTTCGTGCTG 
CTGATCGTGC TGTTGTCGCT GTTCGGCTGG ATCGGCCTGT CCGATTACGT GCGCGCCGAG 
TTCCTGCGCA ACCGCACGCA GGACTACGTA CGCGCCGCGC GCGCGATGGG CCTCACGAAC 
TGGCAGATCA TCTGGCGCCA CGTGCTGCCC AACAGCCTCA CGCCCGTCAT CACGTTCCTG 
CCGTTCAGGA TGAGCGGCGC GATTCTCGCG CTCACGAGCC TCGACTTCCT CGGGCTCGGC 
GTGCCGCCGC CGACGCCGAG CCTCGGCGAG CTGCTCGCGC AGGGCAAGGC GAATCTCGAC 
GCGTGGTGGA TCTCGCTCGC GACGTTCTGC GTGCTCGTCG CGACGCTGTT GCTGCTCACG 
TTCATGGGCG ACGCGCTGCG CAACGCGCTC GACACGCGGA TCGCGGATAC CGCGCGCGCC 
GCGGGGCGTC TGCAATGA
 
Protein sequence
MSRLAVSSRI DAARARVSPS PARRVWLRFK AQRLGYWSLV IFAIAFAASL AAPLWSNDKP 
LVVRYDGQFY FPLFKSYPET TFGGDFPTPA DYLDPYVRGK LDAPGNFVLY PPNRYYYDTL 
NYFSKRPNPA PPSRENWLGT DAQGRDLLAR LVYGFRESVE FALILTFIGT LLGIAAGAVQ 
GFFGGRIDIV GQRLIEIWSS MPELYLLIIF ASVFEPSFVL LIVLLSLFGW IGLSDYVRAE 
FLRNRTQDYV RAARAMGLTN WQIIWRHVLP NSLTPVITFL PFRMSGAILA LTSLDFLGLG 
VPPPTPSLGE LLAQGKANLD AWWISLATFC VLVATLLLLT FMGDALRNAL DTRIADTARA 
AGRLQ