Gene BMA1563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMA1563 
Symbolsmc 
ID3088251 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei ATCC 23344 
KingdomBacteria 
Replicon accessionNC_006348 
Strand
Start bp1623708 
End bp1627220 
Gene Length3513 bp 
Protein Length1170 aa 
Translation table11 
GC content70% 
IMG OID637562253 
Productchromosome segregation protein SMC 
Protein accessionYP_103203 
Protein GI53723747 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1196] Chromosome segregation ATPases 
TIGRFAM ID[TIGR02168] chromosome segregation protein SMC, common bacterial type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.438222 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGTCTGA GCTCGATCAA ACTCGCTGGC TTCAAATCTT TCGTCGATCC CACGCACTTC 
CAGGTTCCAG GTCAACTGGT CGGCGTGGTG GGCCCGAACG GGTGCGGCAA GTCCAACATC
ATCGACGCCG TGCGCTGGGT GCTCGGCGAG TCGCGCGCCT CCGAGCTGCG CGGCGAGTCG
ATGCAGGACG TGATCTTCAA CGGCTCGACG ACGCGCAAGC CCGGCAGCCG GGCGAGCGTC
GAGCTGATCT TCGACAACTC CGACGGCCGC GCGGCCGGCC AGTGGGGCCA GTACGGCGAG
ATCGCCGTGA AGCGCGTGCT CACGCGCGAC GGCACGTCGA GCTATTACAT CAACAATCTG
CCCGCGCGGC GCCGCGACAT CCAGGACATC TTCCTCGGCA CGGGCCTCGG CCCGCGTGCG
TACGCGATCA TCGGGCAGGG GATGATCGCG CGGATCATCG AGGCGAAGCC CGAAGAGCTG
CGCGTGTTCC TCGAAGAGGC GGCGGGCGTG TCGAAGTACA AGGAGCGCCG CCGCGAGACC
GAGAACCGGC TGCACGACAC GCGCGAGAAT CTGACGCGCG TCGAGGACAT CGTCCGCGAG
CTCGGCGCGA ATCTCGAGAA GCTCGAGGCG CAGGCGGTGG TCGCGACGAA GTACAAAGAG
CTCGTCGCCG ACGGCGAGGA GAAGCAGCGC CTGCTGTGGC TGCTGCGCAA GAACGAGGCG
GCCGCCGAGC AGGACAGGCA GCGCCGTGCG ATCGGCGACG CGCAGATCGA GCTCGACGCG
CAGACCGCGA AGCTGCGCGA AGTCGAGGCG CAGCTCGAGA CGCTGCGCGT CGCGCACTAT
TCGGCGAGCG ACGCGATGCA GGGCGCGCAG GGCGCGCTCT ACGAGGCGAA CGCCGAGGTG
AGCCGGCTCG AGGCGCAGAT CAAGTTCATC GTCGAGTCGC GCAACCGCGT GCAGGCGCAG
ATCGCCGCGC TCGTCGCGCA GCAGGAGCAG TGGCGCGCGC AGGCGGACAA GGCGCAGGGC
GATCTCGAAG CGGCCGAAGA GGCGCGCGCG GTCGCCGACG AAAAGGCGGC GATCGCCGAG
GACGACGCGG CCGCGAAGCA CGACGCGCTG CCCGCGCTCG AGGCGCGCTG GCGCGATGCG
CAGACGGGCC TGAACGACGA GCGCGGCCGG ATCGCGCAGA CCGAACAGGC GCTGAACCTC
GAAGCCGCGC ACCAGCGCAA CGCCGATCAG CAATTGCAGC AGTTGCAGCA GCGCCACGAG
CGCCTGAAGG TCGAGGCGGG CGGCCTCGAC GCGCCGGACG AGGCGCAGCT CGAGGAGTTG
CGGATGCAGC TCGCCGAGCA CGAGGCGATG CTGGCCGACG CGCAGGCGCG CCTCGCCGAC
GCGCAGGAAG CGCTGCCGCG CCTCGACGCG CAGCGCCGCG CGGCGCACGA GCGCGTGCAG
GCCGAGAGCG CGCAGATCCA TCAGCTCGAA GCGCGTCTCG CCGCGCTCAA GCAGTTGCAG
GAAAACGTGC AGACGCAGGG CAAGATCCAG CCGTGGCTCG ACAAGCACGA GCTCGGCGCG
CTGCCGCGTC TGTGGAAGAA GCTGCACGTC GAGGCCGGCT GGGAAACCGC GCTCGAAGCG
GTGCTGCGCG AGCGGCTCGC CGCGCTCGAA GTGTCGAATC TCGACTGGGT GAAGGCGTTC
GCCACCGACG CGCCGCCCGC GAAGCTCGCG TTCTACGCGC CGCCCGCCGC GGGCGAGCCG
CTCGCCGCGC CGGGCGCGTT GCGCCCGCTC CTGCCGCTCG TGCGCATCGA CGACGCGGGC
TTGCGCGCGG TGCTCAACGA TTGGCTCGGC ACGGTGTTCG TCGCCGACGA CCTCGCGCAG
GCGCTCGCCG CGCGCATGCA ATTGCCGCAG GGCGGCGCGT TCGTCGTGAA GGCGGGCCAC
GTCGTCACGC GCTCGGGCGT GCAGCTCTAT GCGGCCGACT CCGAGCAGGC GGGCATGCTC
GCGCGCGCGC AGGAAATCGA GAACCTGACG CGCCAGGTGC GCGCGCAGGC GCTCCTGTCC
GACGAGGCGA AGGCGGCGGC GATCCGCGCG GAAGCCGCGC ACACGCAGGC GTCGCAGGCG
CTGACCGAAG TGCGCGCGCA GGCCGAGCGT GCGACGCAGC GCGTGCACGC GCTGCAGATG
GACGTGCTCA AGCTCACGCA GGCGCACGAG CGCTATACGC AGCGCAGCAC GCAGATCCGC
GAGGAACTCG AGGAGATCGG CGCGCAGATC GAGGAGCAGC GTGCGCTGCG CGCGGAGTCG
GAGGCGAATT TCGAGCGCCA CGACGCCGAG CTCGCCGAAT TGCAGGCGCG CTTCGAGGAC
AATCAGCTCG CGTTCGAATC GCTCGACGAG ACGCTGACGA ACGCGCGCCA GGAGGCGCGC
GAGCGCGAGC GCGCGGCCAC CGACGCGCGC TTCGCCGCGC GCCAGTCCGC GAACCGCATC
GACGAGCTGA AGCGCTCGAT CCAGGTCGCG CACGAGCAGG CCGAGCGCGT CGCGGCGTCG
CTCGAGGATG CGCGCGCGGA GCTCGAGACG ATCAACGAGC AGACCGCGCA CACCGGCCTG
CAGGACGCGC TCGAAGTGCG CGCGGCGAAG GAGCAGGCGC TCGGCGCCGC GCGCGCGGAG
CTCGACGATC TCACGGCGAA GCTGCGCGCG GCCGACGAGG CGCGGCTCGC CGCCGAGCGC
TCGCTGCAGC CGCTGCGCGA TCGCATCACC GAGCTGCAAC TGAAGGAGCA GGCGGCGCGT
ATGACGGGCG AGCAGTTCGC CGAGCAGCTC GCGACGGCCG AGGTCGACGA GGCCGCGCTG
AAGGAAAAGC TCATGCCGGA CATGAAGCCG TCGTACCTGC AGGGCGAGGT CACGCGGATC
AACAACGCGA TCAACGCGCT CGGCCCGGTC AACATGGCGG CGCTCGACGA GCTCGCGGCC
GCGAGCGAGC GCAAGGTGTT CCTCGATGCG CAATCGGCCG ATCTGACGAA CGCGATCGAG
ACGCTCGAGG ACGCGATCCG CAAGATCGAC CAGGAAACGC GCGCGCTCCT GCAGGCGACC
TTCGACGAAG TGAACCGCCA TTTCAGCGAT CTGTTCCCGC GCCTGTTCGG CGGCGGGCAG
GCGAAGCTCA TCATGACGGG CGACGAGATT CTCGACGCCG GCGTGCAGGT GATGGCGCAG
CCGCCCGGCA AGAAGAACGC GACGATTCAC CTGCTGTCGG GCGGCGAGAA GGCGCTGACG
GCGACCGCGC TCGTGTTCGC GATGTTCCAG CTGAATCCGG CGCCGTTCTG CCTGCTCGAC
GAGGTCGACG CGCCGCTCGA CGACGCGAAC ACCGAGCGCT TCGCGAATCT CGTGCGCGCG
ATGTCCGACA AGACGCAGTT CCTTTTCATC TCGCACAACA AGATCGCGAT GGAGATGGCG
CAGCAACTGA TCGGCGTGAC GATGCAGGAG CAGGGCGTAT CGCGGATCGT CGCGGTCGAC
ATGGAAACGG CCGCGGGTTT TGCCCAGAAT TGA
 
Protein sequence
MRLSSIKLAG FKSFVDPTHF QVPGQLVGVV GPNGCGKSNI IDAVRWVLGE SRASELRGES 
MQDVIFNGST TRKPGSRASV ELIFDNSDGR AAGQWGQYGE IAVKRVLTRD GTSSYYINNL
PARRRDIQDI FLGTGLGPRA YAIIGQGMIA RIIEAKPEEL RVFLEEAAGV SKYKERRRET
ENRLHDTREN LTRVEDIVRE LGANLEKLEA QAVVATKYKE LVADGEEKQR LLWLLRKNEA
AAEQDRQRRA IGDAQIELDA QTAKLREVEA QLETLRVAHY SASDAMQGAQ GALYEANAEV
SRLEAQIKFI VESRNRVQAQ IAALVAQQEQ WRAQADKAQG DLEAAEEARA VADEKAAIAE
DDAAAKHDAL PALEARWRDA QTGLNDERGR IAQTEQALNL EAAHQRNADQ QLQQLQQRHE
RLKVEAGGLD APDEAQLEEL RMQLAEHEAM LADAQARLAD AQEALPRLDA QRRAAHERVQ
AESAQIHQLE ARLAALKQLQ ENVQTQGKIQ PWLDKHELGA LPRLWKKLHV EAGWETALEA
VLRERLAALE VSNLDWVKAF ATDAPPAKLA FYAPPAAGEP LAAPGALRPL LPLVRIDDAG
LRAVLNDWLG TVFVADDLAQ ALAARMQLPQ GGAFVVKAGH VVTRSGVQLY AADSEQAGML
ARAQEIENLT RQVRAQALLS DEAKAAAIRA EAAHTQASQA LTEVRAQAER ATQRVHALQM
DVLKLTQAHE RYTQRSTQIR EELEEIGAQI EEQRALRAES EANFERHDAE LAELQARFED
NQLAFESLDE TLTNARQEAR ERERAATDAR FAARQSANRI DELKRSIQVA HEQAERVAAS
LEDARAELET INEQTAHTGL QDALEVRAAK EQALGAARAE LDDLTAKLRA ADEARLAAER
SLQPLRDRIT ELQLKEQAAR MTGEQFAEQL ATAEVDEAAL KEKLMPDMKP SYLQGEVTRI
NNAINALGPV NMAALDELAA ASERKVFLDA QSADLTNAIE TLEDAIRKID QETRALLQAT
FDEVNRHFSD LFPRLFGGGQ AKLIMTGDEI LDAGVQVMAQ PPGKKNATIH LLSGGEKALT
ATALVFAMFQ LNPAPFCLLD EVDAPLDDAN TERFANLVRA MSDKTQFLFI SHNKIAMEMA
QQLIGVTMQE QGVSRIVAVD METAAGFAQN