Gene BMA1542 details

Gene Information

• Locus tag: BMA1542
• Symbol: lpxB
• ID: 3088238
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia mallei ATCC 23344
• Kingdom: Bacteria
• Replicon accession: NC_006348
• Strand: -
• Start bp: 1599101
• End bp: 1600267
• Gene Length: 1167 bp
• Protein Length: 388 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 637562232
• Product: lipid-A-disaccharide synthase
• Protein accession: YP_103182
• Protein GI: 53723726
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0763] Lipid A disaccharide synthetase
• TIGRFAM ID: [TIGR00215] lipid-A-disaccharide synthase

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.132773
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGTTCC AACTCACACC GCTGCGCGTC GCGCTCGTCG CGGGCGAGCC GTCGGGTGAT 
CTGCTCGGCG CGTCGCTCCT CGGCGGGCTG CATGCGCGGC TGCCCGCGTC GTCCCGCTAC 
TACGGGATCG GCGGGCCGCG CATGAGCGCC GTGGAATTCG ATGCGCACTG GCCGATGGAA 
AAGCTCGCGG TGCGCGGCTA CGTCGAGGCG CTCAAGCACA TCCCCGAGAT CCTGCGCATT 
CGCGGCGAAC TCAAGCGCCA GTTGCTCGCC GAGCCGCCCG ACGCATTCGT CGGCATCGAC 
GCGCCCGATT TCAACTTCGG CCTCGAGCAG GCGTTGCGCG GCGCCGGCAT TCCGACGATC 
CACTTCGTCT GCCCGTCGAT CTGGGCATGG CGCGGCGGCC GGATCAAGAA GATCGTCAAG 
GCCGTCGACC ACATGCTGTG CCTGTTCCCG TTCGAGCCCG AACTGCTCGA GAAGGCGGGC 
GTCGCGGCGA CGTTCGTCGG CCATCCGCTG GCCGACGAGA TTCCGCTCGA GCCCGATACG 
CACGGCGCGC GGATCGCGCT CGGGCTGCCG GGCGGGGGGC CCGTGATCGC GGTGCTGCCG 
GGCAGCCGCC GCTCGGAGAT CGAGTTGATC GGCCCGACAT TCTTCGACGC GATGGAACTG 
ATGCAGCAGC GCGAGCCCGG CGTGCGCTTC GTCGTGCCGG CCGCGACGCC CGCGCTGCGC 
GCGTTGCTGC AGCCGCTCGT CGACGCGCAT CCGTCGCTGT CGGTTACGCT GACCGAGGGG 
CGCGCGCAGG TCGCGATGAC GGCGGCCGAC GCGATCCTCG TGAAAAGCGG CACGGTGACG 
CTCGAAGCGG CGCTGCTCAA GAAGCCGATG GTGATTTCGT ACAAGGTGCC ATGGCTCACC 
GGGCAGATCA TGCGCCGGCA GGGCTATCTG CCGTACGTCG GCCTGCCGAA CATTCTCGCG 
GGCCGCTTCG TCGTGCCCGA GCTGCTGCAG CATTTCGCGA CGCCCGACGC GCTCGCCGAC 
GCGACGCTCA CGCAACTGCG CGACGATGCG AACCGTCGCG CGCTCGCCGA CATTTTCACC 
GACATGCATC TCGCGTTGCG CCAGAATACC GCGCAGCGCG CGGCCGAGGC CGTCGCGCAC 
GTGATCGACA GCAGGAAGCC GCGCTGA 

 

Protein sequence

MAFQLTPLRV ALVAGEPSGD LLGASLLGGL HARLPASSRY YGIGGPRMSA VEFDAHWPME 
KLAVRGYVEA LKHIPEILRI RGELKRQLLA EPPDAFVGID APDFNFGLEQ ALRGAGIPTI 
HFVCPSIWAW RGGRIKKIVK AVDHMLCLFP FEPELLEKAG VAATFVGHPL ADEIPLEPDT 
HGARIALGLP GGGPVIAVLP GSRRSEIELI GPTFFDAMEL MQQREPGVRF VVPAATPALR 
ALLQPLVDAH PSLSVTLTEG RAQVAMTAAD AILVKSGTVT LEAALLKKPM VISYKVPWLT 
GQIMRRQGYL PYVGLPNILA GRFVVPELLQ HFATPDALAD ATLTQLRDDA NRRALADIFT 
DMHLALRQNT AQRAAEAVAH VIDSRKPR