Gene BMA1538 details

Gene Information

• Locus tag: BMA1538
• ID: 3088106
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia mallei ATCC 23344
• Kingdom: Bacteria
• Replicon accession: NC_006348
• Strand: -
• Start bp: 1594219
• End bp: 1596120
• Gene Length: 1902 bp
• Protein Length: 633 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 637562228
• Product: serine protease
• Protein accession: YP_103178
• Protein GI: 53723722
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG4934] Predicted protease

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.00041451
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGGAACG ACGAAATGAC GTCAAGAAAA TGGGCCAGGC CTCGCGCTTC GCAGGCGAAG 
CATGCGATTT ACGCGGCGAC GTTCTTTGCC GCGGCGGCAT TGAGCGCGCA CGCGGCGGCG 
GCATGGGTCG ACACGCAAAC CGGCGCGTAT CCGGCGCTTG CGCAGCAGGC GCTTGCGGCG 
TCGCAAGCTT CGGCGGCGGC AACCGCGGCC GGAAAGGCGA TCGACACGGC GCCCGGCGAG 
CCGGTGCGGG TCGTCGTCAG TCTCAATCTC AACGACGAAG CGAGGCTCGA TCGCTTCCTG 
CGCGATCTGC ATACGCCCGG CAGTGCCGCT TACGGCCGGC ATCTGACGCC CGCCGAATTC 
GCCGCGCAGT ATGCGCCGAC GCCGCAGCAG GTCGCGCTCG TCGAAGCGCA TCTGCGCCGG 
GCCGGATTCC GCGACATCGA GGTGGCGCCG AACCGGCTGC TGATCTCGGC GACGGGCACC 
GCCGCCGCGG TCAAGACGGC GTTCAACACG CGGCTCAAGC GCTTTACGCT CGAAGGCCGG 
CGCGTGTATG CGAACCAGGA CGCGGCGCAG GTGCCCGCCG AGCTCGGCCG AATCGTTGGC 
GCGGTGCTCG GGCTCGATAA TGCGACGCTC GCGCGCACGT ACAACCGCCA GGCGGCGGTG 
ACGGGCGCGG TCGGCGGCGC GAAGGCGTCG CTGGCCGCGC GCGCGAGCGA CGCGTCGGCC 
GCCGCGAGCG GCGCGCCCGT GCTGACGGGA CACGATCCGC TCGAATTCTC GCGAATCTAT 
CGCGCGGGCT CGACGCTGAC GGCGTCGCAG ACGACGGTCG GCGTGATCAT GGCGGGCGAT 
GCTGCGCCCG TGCTGCGGGA TCTCGATACG TTCGCGGCGA AGGCCGGGCT CGCGCGCGTC 
GCGGCGACGG TCACGCGTAC CGGGCCGCCC GGCAGCGATT ACAGCGACAA TTCGGGCCTG 
AGCGAATGGG ATATGGACAG CCAGGCGATC GTCGGCGCGG CGGGCGGCGC GGTGAAGGGG 
CTTGTGCTCT ACGCGGCGCC CTCGATGCTG CTCTCCGACA TCACCTCGGC GTACAACCGC 
GCGGTCGTCG ACAACGTCGC GAAGGTGATC AACGTGTCGC TCGGCGTGTG CGAGGCGGAC 
GCACGCGCGT CCGGCACGCA GGCGGCGGAC GACCGCATCT TCAAGAGCGC GGTCGCGCAG 
GGGCAGACGT TCGTCGTCGC GGCGGGCGAC GCGGGCGCGT ACGAATGCAG CGTGAGCCGC 
GTGTCGGGCG GGCAGGGCGT GCCGGCGCGA TCGAACTATT CGGTGAGCGA GCCCGCGACG 
TCGCCGTACG TCGTCGCGGT CGGCGGCACG ACGCTGTCGA TCGACAGGAC GACGCTCGCC 
TACGCGGGCG AAGTCGCATG GAACGAGGGT TTGCAGCCGA TCGGCGTGTA CGACGCGTAC 
GGCAGCTACG ACGGCACGAG GCGTCTGTGG GCGACGGGCG GCGGCTACAG CCGAAGCGAA 
GCGGCACCGG CGTGGCAGCG AAGCGTGCTC GGCGCGTCGG CGAAAGCGCG CGCGCTGCCC 
GATGTCGCAT TCGATGCGGA CGGCCGCAGC GGCGCGCACG TCTACGTGAA CGGCCGGACC 
GAGCAATGGG GCGGCACGAG CCTCGCGGCG CCGATCTTCA CGGGCATCTG GGCGCGCGTG 
CAATCCGACA ACGGCAACCG GCTCGGTTTT CCGCTCGCGA GCCTCTATCG CTACGCGCCG 
GCCAACGGCG CGTTCGCGCA TGACGTGAAA TCCGGCAACA ACGGCTCGGG CGGCTATGGC 
TACAAGGCCG GTGTGGGCTG GGATCCGGTG ACGGGCTTCG GCAGCCTCGA CATCGCGAAC 
TTCGCCGCGT TCGTCAAGCA GACGGCCGAT TTCGCGCGAT AA 

 

Protein sequence

MRNDEMTSRK WARPRASQAK HAIYAATFFA AAALSAHAAA AWVDTQTGAY PALAQQALAA 
SQASAAATAA GKAIDTAPGE PVRVVVSLNL NDEARLDRFL RDLHTPGSAA YGRHLTPAEF 
AAQYAPTPQQ VALVEAHLRR AGFRDIEVAP NRLLISATGT AAAVKTAFNT RLKRFTLEGR 
RVYANQDAAQ VPAELGRIVG AVLGLDNATL ARTYNRQAAV TGAVGGAKAS LAARASDASA 
AASGAPVLTG HDPLEFSRIY RAGSTLTASQ TTVGVIMAGD AAPVLRDLDT FAAKAGLARV 
AATVTRTGPP GSDYSDNSGL SEWDMDSQAI VGAAGGAVKG LVLYAAPSML LSDITSAYNR 
AVVDNVAKVI NVSLGVCEAD ARASGTQAAD DRIFKSAVAQ GQTFVVAAGD AGAYECSVSR 
VSGGQGVPAR SNYSVSEPAT SPYVVAVGGT TLSIDRTTLA YAGEVAWNEG LQPIGVYDAY 
GSYDGTRRLW ATGGGYSRSE AAPAWQRSVL GASAKARALP DVAFDADGRS GAHVYVNGRT 
EQWGGTSLAA PIFTGIWARV QSDNGNRLGF PLASLYRYAP ANGAFAHDVK SGNNGSGGYG 
YKAGVGWDPV TGFGSLDIAN FAAFVKQTAD FAR