| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMA1491 |
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| Symbol | mfd |
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| ID | 3088763 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia mallei ATCC 23344 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_006348 |
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| Strand | + |
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| Start bp | 1544865 |
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| End bp | 1548338 |
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| Gene Length | 3474 bp |
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| Protein Length | 1157 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637562185 |
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| Product | transcription-repair coupling factor |
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| Protein accession | YP_103135 |
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| Protein GI | 53723684 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1197] Transcription-repair coupling factor (superfamily II helicase) |
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| TIGRFAM ID | [TIGR00580] transcription-repair coupling factor (mfd) |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGACA ACGCCTCCCC TTCGCAGTCC CCCGTCGCGC TCGTCAAGGC GGGCCAGCGC
TTCGCCTTCG ACGGCGCGCA CGGCTCCGCC GACGCGCTCG TCATCGCCCG CTATCTCGCC
GCGCACCGCG CGCAGGTGCC GCTTCTCGCC GTGATCTGCG CGAACGCGGT CGACGCGCAA
CGGCTCGCGC AGGAGCTCGC CTACTTCGCG CCCGACGCGC GCGTGCGCGT GCTGCCCGAC
TGGGAGACGC TGCCGTACGA CACGTTCTCG CCGCACCAGG ATCTCGTGTC CGAGCGGCTC
GCGACGCTGC ACGACCTCGG CGAAGGCCGC TGCGACATCC TGCTCGTGCC CGCGACGACG
GCGCTCTACC GGATGCCGCC CGCGTCGTTC CTCGCCGCGT ACACGTTCTC GTTCACGCAG
GGCGAGCGGC TCGACGAAGC GAAGCTGAAG GCGCAGCTGA CGCTCGCCGG CTACGAGCAC
GTGAGCCAGG TCGTGCGGCC CGGCGAATAC TGCGTGCGCG GCTCGCTGAT CGACCTGTTC
CCGATGGGCT CGCCGCTGCC GTACCGGATC GATCTGTTCG ACGATCAGGT CGACTCGATC
CGCGCGTTCG ATCCGGACAC GCAGCGCAGC CTCTACCCGG TGCGCGACGT GCGCCTGCTG
CCCGGCCGCG AATTCCCGTT CGACGAGGCC GCGCGCACCG CGTTCCGAAG CCGCTGGCGC
GAGACGTTCG AGGGCGACCC GAGCCGCGCG CCGATCTACA AGGACATCGG CAACGGCGTG
CCGTCGGCCG GCATCGAGTA TTACCTGCCG CTCTTCTTCG ACGAGACGGC GACGCTCTTC
CACTATCTGC CCGAGCGCGC GCAGCTCGTG TTCACGGGCG ATCTCGACGC GGCGATCAAG
CGCTTCACCG CCGACACGAA GCAGCGCCAC GCGTTCCTGT CGCACGATCG CGAGCGGCCG
ATCCTCGAGC CGCAGCGCCT GTTCCTCTCC GACGACGATT TCTACCTGCT CGCCAAGCCG
TTCGCGCGGA TCGTGCTGCC CGCGCAGCCG TCGGGCGGCT GGGCCGCGCC GCTGCCGAAT
CTCGCGCTCG AGCGCCACGC GGACGCGCCG CTCGCCGCGT TCGCCGCGTA TCTCGAAACG
ACGAAGAACC GCGTGCTTTT CACCGTCGAA TCGGCGGGCC GCCGCGAGAC GATCGCGCAA
CTGTTCGCCG AGCACCATCT GCGGCCGGCG GGCAGCGACA GCTTCGCCGC GTGGCTCGCG
AGCGACGAGC GCTTCGCGCT CGGCGTCGCG CCCCTCGCGA ACGGCTTCGC GGTGCCGGGC
GAGGGTTACG CGATCGTCAC CGAGACCGAG CTGTACGGCG CGCTCGGCCG CCGCGCGGGA
CGCCGCCGCC AGGAACAGGC GAGCAACGTC GACGCGATGG TGCGCGATCT GTCCGAGCTG
AAGGTGGGCG ACCCGGTCGT CCATGCGCAG CACGGGATCG GCCGCTACAT GGGGCTCGTG
TCGATGGATC TCGGCGAAGG CGACACCGAG TTCCTGCATC TCGAATACGC GGGCGACAGC
AAGCTGTACG TGCCCGTCGC GCAACTGCAC GTGATCTCGC GCTACAGCGG CGCGGACCCG
GACAGCGCGC CGCTGCACGC GCTCGGCTCC GGCCAGTGGG AGCGCGCGAA GCGCCGCGCC
GCGCAGCAGA TCCGCGATAC GGCCGCCGAG CTGCTGAACC TGTACGCGCG CCGCGCGGCG
CGCGAGGGCC ACGCGTTCGG GCTCGACCCG CGCGACTACG TGAAGTTCGC CGACAGCTTC
GGCTTCGAGG AAACGCCGGA CCAGGCCGCG GCGATCGCGG CCGTGATCGG CGACATGACA
AGCGGCAAGC CGATGGACCG CCTCGTGTGC GGCGACGTCG GCTTCGGCAA GACCGAGGTC
GCGCTGCGCG CGGCATTCAT CGCGGTGATG GGCGGCAAGC AGGTCGCGCT GCTCTCGCCG
ACCACGCTGC TCGCCGAGCA GCACACGCAG ACCTTCGCCG ACCGCTTCGC GGACTGGCCG
GTGCGCATCG CCGAGCTGTC GCGCTTCAAG ACCGCGAAGG AAGTGAATGC GGCGATCGCG
CAGATCAACG AAGGCAGCGT CGACATCGTG ATCGGCACGC ACAAGCTGCT GTCGTCGGAC
GTGCAGTTCA AGCGCCTCGG CCTCGTGATC ATCGACGAGG AGCACCGCTT CGGCGTGCGC
CAGAAGGAAG CGCTGAAGGC GCTGCGCGCG GAAGTGGACG TGCTCACGCT GACCGCGACG
CCGATCCCGC GCACGCTCGG CATGGCGCTC GAAGGGCTGC GCGATTTCTC GGTGATCGCG
ACCGCGCCGC AGAAGCGGCT CGCGATCAAG ACCTTCGTGC GCCGCGAGGA AGAAAGCGTG
ATCCGCGAGG CGATGCTGCG CGAGCTCAAG CGCGGCGGCC AGGTGTACTT CCTGCACAAC
GAGGTCGAGA CGATCGAGAA CCGCAAGGCG ATGCTCGAGG AACTGGTGCC CGAGGCGCGC
ATCGTGATCG CGCACGGCCA GATGCACGAG CGCGAGCTCG AACGCGTGAT GCGCGATTTC
GTCGCGCAAC GCGCGAACGT GCTGCTGTGC ACGACGATCA TCGAGACCGG CATCGACGTG
CCGAGCGCGA ACACGATCAT CATGCACCGC GCAGACAAGT TCGGCCTCGC GCAGTTGCAC
CAGTTGCGCG GGCGCGTCGG ACGCTCGCAC CATCAGGCAT ACGCGTACCT GCTCGTGCAC
GATCCGCAAG CGCTGACGAA GCAGGCGCAG CGCCGGCTTG AGGCGATCCA GCAGATGGAG
GAGCTCGGCT CGGGCTTCTA TCTCGCGATG CACGACCTCG AGATCCGCGG CACCGGCGAA
GTGCTCGGCG ACAAGCAGTC GGGCGAGATC CACGAGATCG GCTTCCAGCT CTACACCGAG
ATGCTGAACG ATGCGGTGAA GGCGCTGAAG AACGGCAAGG AGCCGGACCT GACCGCGCCG
CTCGCCGCGA CGACCGAGAT CAACCTGCAC GCGCCCGCGA TCCTGCCCGC CGACTATTGC
GGCGACGTGC AGGAGCGGCT GTCGCTGTAC AAGCGGCTCG CGAACTGCGA GCACGGCGAT
GCGATCGACG GCATCCAGGA GGAGCTGATC GACCGCTTCG GCAAACTGCC GCCGCAGGCG
CACGCGCTCG TCGAAACGCA CCGGCTGCGG CTCGCCGCGA AGCCGCTTGG CATCGTGAAG
ATCGACGCGA GCGAAGCGGC GATCGGGCTG CAGTTCGTGC CGAATCCGCC GATCGATCCG
ATGCGGATCA TCGACATGGT GCAGAAGCAC CGGCACATCA AGCTCGCGGG CCAGGACAAG
CTGCGCATCG AGACGCGCAC GCCGGACCTC GCGGTGCGCG TGTCGACGGT GAAGGAAACG
CTGCGCGCGC TCGGCCAGCC GCAGCAGCCG CGCGCGCAGG CGGCGGCGCG GTAG
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| Protein sequence | MSDNASPSQS PVALVKAGQR FAFDGAHGSA DALVIARYLA AHRAQVPLLA VICANAVDAQ
RLAQELAYFA PDARVRVLPD WETLPYDTFS PHQDLVSERL ATLHDLGEGR CDILLVPATT
ALYRMPPASF LAAYTFSFTQ GERLDEAKLK AQLTLAGYEH VSQVVRPGEY CVRGSLIDLF
PMGSPLPYRI DLFDDQVDSI RAFDPDTQRS LYPVRDVRLL PGREFPFDEA ARTAFRSRWR
ETFEGDPSRA PIYKDIGNGV PSAGIEYYLP LFFDETATLF HYLPERAQLV FTGDLDAAIK
RFTADTKQRH AFLSHDRERP ILEPQRLFLS DDDFYLLAKP FARIVLPAQP SGGWAAPLPN
LALERHADAP LAAFAAYLET TKNRVLFTVE SAGRRETIAQ LFAEHHLRPA GSDSFAAWLA
SDERFALGVA PLANGFAVPG EGYAIVTETE LYGALGRRAG RRRQEQASNV DAMVRDLSEL
KVGDPVVHAQ HGIGRYMGLV SMDLGEGDTE FLHLEYAGDS KLYVPVAQLH VISRYSGADP
DSAPLHALGS GQWERAKRRA AQQIRDTAAE LLNLYARRAA REGHAFGLDP RDYVKFADSF
GFEETPDQAA AIAAVIGDMT SGKPMDRLVC GDVGFGKTEV ALRAAFIAVM GGKQVALLSP
TTLLAEQHTQ TFADRFADWP VRIAELSRFK TAKEVNAAIA QINEGSVDIV IGTHKLLSSD
VQFKRLGLVI IDEEHRFGVR QKEALKALRA EVDVLTLTAT PIPRTLGMAL EGLRDFSVIA
TAPQKRLAIK TFVRREEESV IREAMLRELK RGGQVYFLHN EVETIENRKA MLEELVPEAR
IVIAHGQMHE RELERVMRDF VAQRANVLLC TTIIETGIDV PSANTIIMHR ADKFGLAQLH
QLRGRVGRSH HQAYAYLLVH DPQALTKQAQ RRLEAIQQME ELGSGFYLAM HDLEIRGTGE
VLGDKQSGEI HEIGFQLYTE MLNDAVKALK NGKEPDLTAP LAATTEINLH APAILPADYC
GDVQERLSLY KRLANCEHGD AIDGIQEELI DRFGKLPPQA HALVETHRLR LAAKPLGIVK
IDASEAAIGL QFVPNPPIDP MRIIDMVQKH RHIKLAGQDK LRIETRTPDL AVRVSTVKET
LRALGQPQQP RAQAAAR
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