Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMA1482 |
Symbol | |
ID | 3088717 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei ATCC 23344 |
Kingdom | Bacteria |
Replicon accession | NC_006348 |
Strand | + |
Start bp | 1535128 |
End bp | 1536051 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637562176 |
Product | phytoene synthase, putative |
Protein accession | YP_103126 |
Protein GI | 53723680 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1562] Phytoene/squalene synthetase |
TIGRFAM ID | [TIGR03465] squalene synthase HpnD |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.135853 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTCGCCGC AACATGGCGC GATGCCGGGC CGTCCAGCGC CCGCGCTCCC CGCGCCGAGC CGATCCCGCC TCACTCGTTC CGTCCCCGTG AATTTCGACG AATACTGCCA GCAGAAAGCC GCGCCGCCCG GCTCCAGTTT TTACTATGCG CTGCGCCAGG CGCCGCTCGC GCGCCAGCCG CTCGTCGCCG CGCTGTTCGC GCTGCGTCGC GAGCTCGAGC AAACGGTGAA GGAAGTCAGC GATCCGACCG TCGGCCACAC CAAGCTCGCG TGGTGGCAAA AGGAGCTCGC CGCGCTCGCA TCCGGCCATC CGTCGCATCC GGTGTCGCAA GCGCTCGCCG CGCATCATCC GGACATCGCG CGCGAAACCG ATGCGCTGCG CACGCTCGTC GCCGGTTACG GAATGGACCT CGAGCAGGCG CGCTATCTGG ACTTCGCGAA CCTGCGCCGT TACGCCGATC AAACGGGCGG CATGTTCGCC GCGCTCGTCG CAAGCGCCAG CGCCGGCCGG CCCACCGCGA ACGGCGCGCG CTGGGCGCAG CCGCTCGGCC AGGCGCTCAC GCTCGCGCAA TTCGTGCAGG ATCTCGGGCA GGATGCGCGG CAGGGCCGCA TCTACGTGCC GATCGACGAG TTGCAACGCT ATGGCGTGAC GGCCGCCGAT CTCCTCAACC GCCGCTACAG CCCCGCCTAC ACCGAGCTGA TGCGCTTCCA GACGTCACGC GCGCGCGACG CACTCAACGC GTCGCTATCC GGCATTCCCG CCGACGAGCG GCGCGCGCAG CGCACGCTGC GTGCGCTCGG CGCGCTCGCG CTCGCGGTGC TCGACGAGAT CGAGCGCGAC GGCTTTCAGG TGCTGCATCA GCGGATCGCG CTCACGCCGA TCCGCAAGCT GTGGATCGCA TGGCGCGCCG CGCGGCGCCG CTGA
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Protein sequence | MSPQHGAMPG RPAPALPAPS RSRLTRSVPV NFDEYCQQKA APPGSSFYYA LRQAPLARQP LVAALFALRR ELEQTVKEVS DPTVGHTKLA WWQKELAALA SGHPSHPVSQ ALAAHHPDIA RETDALRTLV AGYGMDLEQA RYLDFANLRR YADQTGGMFA ALVASASAGR PTANGARWAQ PLGQALTLAQ FVQDLGQDAR QGRIYVPIDE LQRYGVTAAD LLNRRYSPAY TELMRFQTSR ARDALNASLS GIPADERRAQ RTLRALGALA LAVLDEIERD GFQVLHQRIA LTPIRKLWIA WRAARRR
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