Gene BMA1475 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMA1475 
Symbol 
ID3088803 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei ATCC 23344 
KingdomBacteria 
Replicon accessionNC_006348 
Strand+ 
Start bp1530068 
End bp1531090 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content69% 
IMG OID637562170 
Producthistone deacetylase family protein 
Protein accessionYP_103121 
Protein GI53723676 
COG category[B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.157085 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCAGCCGC CGTCGAGCGC GGGCTATGCG GAATCGCCCG ATTCGAAGCG GCGTCTGCTG 
TCGCTCGTGC ACGCGTCCGG GCTCGCGGCG AAACTCGACA TGTCGAGCGC GCCCGCCGCG 
GCCGACGACG ATCTGCGGCG CATCCACCCC GCGCACTACC TCGACGCGTT CAAGCGCGCG 
AGCGACGCGG GTGGCGGCGA TCTCGGCGAA CTCGCGCCGT TCGGCCGTGG CAGCTACGAG 
ATCGCGGCGC TATCCGCGGG GCTCGCGCTC GCCGCCGTCG ACGCGGTGCT CGCCGAGCGC 
ACGGCCAACG CATTCTCGCT GTCGCGCCCG CCCGGCCATC ACTGCCTGCG TGACAAGCCG 
ATGGGTTTTT GCCTGCTCGC GAACATTCCG ATCGCGATCG AGGCCGCGCG CGCGAAACAT 
CGCGTCGAGC GCGTCGCGGT GATCGACTGG GACGTGCATC ACGGCAACGG CACGCAGTCG 
ATCTACTACG ACGATCCGAA CACGCTGACG ATCTCGCTGC ATCAGGACCG CTGCTTTCCG 
CCCGGCTACA GCGGCGCCGA CGAACGCGGC GCGGGCGCGG GCGCGGGCGC GAACGTCAAC 
GTCCCGCTCC TCGCGGGCGC CGGCGACGAC GCGTATCGAT ACGCATTCGA GCGAATCGTG 
CTGCCCGCGC TCGACGCGTT CCGGCCGGAG CTCGTCATCG TCGCGAGCGG GCTCGACGCG 
AATGCGGTCG ACCCGCTCGC GCGGATGCAA CTGCACAGCG ACAGCTACCG GTACATGACG 
CATGCGCTGA AGCAGGCCGC GCAGCGGCAC TGCGGGGGAC GGCTCGTCAT CGTGCACGAG 
GGCGGTTATT CGGAGGCCTA CGTACCGTTT TGCGGGCATG CGATCGTCGA GGCACTGGCG 
GGCATGCGCA CCGACGTCGC CGATCCGATG CTCGAGCTCG CGATCGCGCA GCAGCCCGGC 
GAGCGTTTCA ACGCATTCCA GCGGCAACTG ATCGACGAAA TGGCGACGAG CTTCGGTTAC 
TGA
 
Protein sequence
MQPPSSAGYA ESPDSKRRLL SLVHASGLAA KLDMSSAPAA ADDDLRRIHP AHYLDAFKRA 
SDAGGGDLGE LAPFGRGSYE IAALSAGLAL AAVDAVLAER TANAFSLSRP PGHHCLRDKP 
MGFCLLANIP IAIEAARAKH RVERVAVIDW DVHHGNGTQS IYYDDPNTLT ISLHQDRCFP 
PGYSGADERG AGAGAGANVN VPLLAGAGDD AYRYAFERIV LPALDAFRPE LVIVASGLDA 
NAVDPLARMQ LHSDSYRYMT HALKQAAQRH CGGRLVIVHE GGYSEAYVPF CGHAIVEALA 
GMRTDVADPM LELAIAQQPG ERFNAFQRQL IDEMATSFGY