| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMA1438 |
|---|
| Symbol | |
|---|
| ID | 3089023 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei ATCC 23344 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_006348 |
|---|
| Strand | - |
|---|
| Start bp | 1490499 |
|---|
| End bp | 1492583 |
|---|
| Gene Length | 2085 bp |
|---|
| Protein Length | 694 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637562137 |
|---|
| Product | fatty oxidation complex, alpha subunit, putative |
|---|
| Protein accession | YP_103090 |
|---|
| Protein GI | 53723637 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.000464457 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGTGG ACTACACGAC TCGAGACGGC GTCGCCGTCA TCACGCTCAA CAATCCGCCC
GTCAACGGCC TCGGCCTGTC GACGCGGCTC GGCATCATGG AGGGGCTCGA ACGCGCGCAG
CGCGACCCGG CCGTCGCGGC GATCGTGCTC ACGGGCGCGG GCCGCGCGTT CTCGGGCGGC
GCGGACATCA CCGAATTCAA CACGCCCAAG GCGCTGCAGG AGCCGACGCT GCACACCGTG
ATCGACGCGG TCGAGGCGAG CGGCAAGCCC GTCGTCGTCG CGATCCATAG CGTCGCGATG
GGCGGCGGCC TGGAGCTCGC GCTCGGCGCG CACTATCGCG TCGCGTCGGC CGGCGCGCAG
ATCGCGCTGC CGGAGGTGAA GCTCGGCCTG TTGCCCGGCG CGGGCGGCAC GCAGCGGCTG
CCGCGCGCGG TGGGCCTCGA GACCGCGCTG AACATGATCG TCTCCGGCGC GCCCGTGCCG
TCCGAGCAGC TCGCGAAGAG CGGCCTCTTC GACGCGTTCG TCGAGGGCGA CCTGCTCGAG
GCGGCCGTCG CGTTCGCGCG CAAGGCCGGC GCGGCGAGCG GCCCGCATCC GCGCGTGCGC
GATCGCGAGA TCGTCCATGA GAACGCGGCG GGCTTCATCC AGTTCGCGCG CAACAGCGTG
AAGGCCGTCG CGCAGCATTA TCCGGCGCCG CACAAGTGCA TCGACGCGAT CGAGGCGGGG
GTGTTGCAAG GCTTCGACAA GGGGCTCGCG TTCGAGCGCG ACTGCTTCGT CGCGCTCGTG
CAGACGCCCG AGAGCCGCGC GCTGCGCCAT GCGTTCTTCG GCGAGCGCGC GGCGGGCAAG
ATTGCCGACG TGCCGGCCGA CACGGCCGTG CGCGGGATCG AATCGGTCGC GGTGATCGGC
GCCGGCACGA TGGGCGGCGG GATCACGATG AACTTCCTGA ACGCGGGGCT GCCCGTCACG
CTGCTCGAGA CGAAGCAGGA GGCGCTCGAG CGCGGGCTCG CGACGATCCG CAAGAACTAC
GACGCGCAGG TGAGCAAGGG CAAGCTCACG CAGGAGAAGC TCGACGCGCG GATGGCGTTG
CTGCGCCCGA CGCTGTCGTA CGACGACCTG AAGGACGCCG ATCTCGTGAT CGAGGCGGTG
TTCGAGGAGC TCGGCGTGAA GGAGCAGGTG TTCAAGCGGC TCGACGAGGT CGCGAAGCCG
GGCGCGATCC TCGCGTCGAA CACGTCGACG CTCGACGTGA ACAAGATCGC CGCGTTCACC
CGCCGCCCGC AGGACGTCGT CGGCCTGCAC TTCTTCAGCC CCGCGAACGT GATGAAGCTG
CTCGAGGTGG TGCGCGGCGA GCACACCGCG AAGGACGTGC TCGCCACCGT GATGCAGCTC
GCGAAGAAGA TCCGCAAGAC GGCGGTCGTC TCCGGCGTGT GCGACGGCTT CATCGGCAAC
CGGATGGTCG AGCAGTACAT CCGCCAGGCG CTCTTCATGC TCGAGGAAGG CGCGCTGCCC
GCGCAGATCG ACCGCGCGAT CGAGGCGTTC GGCTTCGCGA TGGGGCCGTT CCGGATGAGC
GATCTCGCCG GCAACGACAT CGGCTGGGCG ATCCGCAAGC GCCGCTATGT CGAGCAGCCG
GATCTGCATT ACTCGAAGAT CGCCGATCGC CTCTGCGAGC AGGGCCGCTT CGGCCAGAAG
ACGGGCGCGG GCTGGTACGA CTACGTGCCG GGCGAGCGGC GCGCGAAGCC GTCGAAGCTC
GTCGACGAGA TGATCGTCGC GTATTCGAGC GAGCGCGGCG TCGCGCGGCG GCAGATCGGC
GACGCCGAGA TCGTGGAGCG GCTCGTCTAC GCGCTCGTCA ACGAAGGCGC GAAGATCCTC
GAGGAGAAGA TCGCGTCGAA GGCGTCCGAC ATCGACATGG TGTATCTCAC CGGCTACGGT
TTTCCGCTCT GGCGCGGCGG CCCGATGCTG TATGCGGACA CGGTCGGCCT CTACAACGTC
GAGCGCGCGA TGCGCGGCTA TGCGCAGCGC GCGAACGGCG ACGCGTGGCA GATCGCGCCG
TCGATCGTCG AGCTCGCGAA GAGCGGGCGC GGTTTCAACG CGTGA
|
|---|
| Protein sequence | MAVDYTTRDG VAVITLNNPP VNGLGLSTRL GIMEGLERAQ RDPAVAAIVL TGAGRAFSGG
ADITEFNTPK ALQEPTLHTV IDAVEASGKP VVVAIHSVAM GGGLELALGA HYRVASAGAQ
IALPEVKLGL LPGAGGTQRL PRAVGLETAL NMIVSGAPVP SEQLAKSGLF DAFVEGDLLE
AAVAFARKAG AASGPHPRVR DREIVHENAA GFIQFARNSV KAVAQHYPAP HKCIDAIEAG
VLQGFDKGLA FERDCFVALV QTPESRALRH AFFGERAAGK IADVPADTAV RGIESVAVIG
AGTMGGGITM NFLNAGLPVT LLETKQEALE RGLATIRKNY DAQVSKGKLT QEKLDARMAL
LRPTLSYDDL KDADLVIEAV FEELGVKEQV FKRLDEVAKP GAILASNTST LDVNKIAAFT
RRPQDVVGLH FFSPANVMKL LEVVRGEHTA KDVLATVMQL AKKIRKTAVV SGVCDGFIGN
RMVEQYIRQA LFMLEEGALP AQIDRAIEAF GFAMGPFRMS DLAGNDIGWA IRKRRYVEQP
DLHYSKIADR LCEQGRFGQK TGAGWYDYVP GERRAKPSKL VDEMIVAYSS ERGVARRQIG
DAEIVERLVY ALVNEGAKIL EEKIASKASD IDMVYLTGYG FPLWRGGPML YADTVGLYNV
ERAMRGYAQR ANGDAWQIAP SIVELAKSGR GFNA
|
|---|
| |