Gene BMA1342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMA1342 
Symbol 
ID3089393 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei ATCC 23344 
KingdomBacteria 
Replicon accessionNC_006348 
Strand- 
Start bp1401311 
End bp1402456 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content69% 
IMG OID637562049 
Productputative lipoprotein 
Protein accessionYP_103002 
Protein GI53723539 
COG category[S] Function unknown 
COG ID[COG1520] FOG: WD40-like repeat 
TIGRFAM ID[TIGR03300] outer membrane assembly lipoprotein YfgL 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCTGC TGAAACGTTA CGCTGCACCC GTTGCCTGCG CGGCGGCCGT CCTGGTTTTC 
GCGGCCTGTT CGTCAACGAA GGACGCGCGC CGCGTGCCGA CGCCGCTCAC CGAGTTCAAA 
CCCGTGCTCG ACGTGCAGCA GGTGTGGACG GCGAGCGTCG GCAAGGGCGG CCGCTACTCG 
TTCTCGCCCG TCGCGGTGGG CGACGCCGTG TATGTCGCCG GCGCGAACGG TTCGGTCGAG 
AAGATCGACG CGAAGACGGG CCAGCAAGTC TGGCGTACGA AGATCGGCTC GGACTTGTCG 
GCGGGCGTCG GCAGCGACGG CAACCTGACC GCGGTCGGCG CGCTGAAGGG CGGCGTGTTC 
GTGCTCGGCC CGGACGGCAA GCAGTTGTGG AAAGCCACCG TGCAAGGCGA GATCTTCTCG 
CCGCCGCTCG TCGGCAACGG TCTCGTGATC GTGCGCACGA TCGACGGCCA GGTGATCGCG 
TTCGCCGCGC AGACGGGCGA GCAGAAGTGG ACTTACCGCA ACCGCGCGGT GCCGCTGAAC 
CTGCGCGTGT CGGCCGGCAT GACGTTCGCG GGCGACGCCG CGGTGCTCGC GGGCTTCCCG 
GGCGGCGGCC TCGTCGCGCT GAACCTGCAG ACGGGCGAGC CGTTCTGGCA GACGCCCGTG 
TCGTTTCCGA AAGGCGTGAC CGAAGTCGAG CGGATCAACG ACGTGACGGG CGCGCCGACG 
CTCGTCGGCG CCGAGACGTG CGCGGTGACG TTCCAGGGGC AGCTCGGCTG CTTCGATGCG 
AACTCGGGCC GCCCGTTGTG GGAAAAGCCG TTTTCGAGCC GCAGCGGCGT CGCGCAGGAC 
GATACGGTCG TCGTGGGCGG CGACGACTGG TCGGTCGTGT CGGCTTACGA CGTCGCGACG 
GGCAAGGCGC TCTGGCGCAA CGACAAGCTG AAGAGCCGCG ACGTCGGCGT GCCGTACCTG 
CTCGGCCACG CGGTCGTGCT CGGCGACTAC AAGGGCTTCG TGCATTTCCT GTCGCGCGAT 
GACGGCACGT TCGTCGCCCG GATGAAGACG GACGGCAGCG CGATCGCCGC CGCGCCCGTG 
CTTGCCGGCA ACACGCTCGT CGTCCTGACG CAGGACGGCG GCGTATACGG TTTCCGTCCG 
CGCTAA
 
Protein sequence
MNLLKRYAAP VACAAAVLVF AACSSTKDAR RVPTPLTEFK PVLDVQQVWT ASVGKGGRYS 
FSPVAVGDAV YVAGANGSVE KIDAKTGQQV WRTKIGSDLS AGVGSDGNLT AVGALKGGVF 
VLGPDGKQLW KATVQGEIFS PPLVGNGLVI VRTIDGQVIA FAAQTGEQKW TYRNRAVPLN 
LRVSAGMTFA GDAAVLAGFP GGGLVALNLQ TGEPFWQTPV SFPKGVTEVE RINDVTGAPT 
LVGAETCAVT FQGQLGCFDA NSGRPLWEKP FSSRSGVAQD DTVVVGGDDW SVVSAYDVAT 
GKALWRNDKL KSRDVGVPYL LGHAVVLGDY KGFVHFLSRD DGTFVARMKT DGSAIAAAPV 
LAGNTLVVLT QDGGVYGFRP R