| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMA1318 |
|---|
| Symbol | rimO |
|---|
| ID | 3089367 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei ATCC 23344 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_006348 |
|---|
| Strand | - |
|---|
| Start bp | 1373726 |
|---|
| End bp | 1375117 |
|---|
| Gene Length | 1392 bp |
|---|
| Protein Length | 463 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637562025 |
|---|
| Product | ribosomal protein S12 methylthiotransferase |
|---|
| Protein accession | YP_102978 |
|---|
| Protein GI | 53723567 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0621] 2-methylthioadenine synthetase |
|---|
| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0862922 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGAAAATT CATTGAAATC AAGCGGTAAG CCGCTCGCCG CGCCCAAGGT GGGTATGGTT
TCGCTCGGGT GCCCGAAGGC CCTCGTCGAC TCCGAGCAGA TCATCACGCA ACTGCGCGCC
GAAGGCTACG AAATCTCCGG CACCTATGAC GGCGCGGATC TCGTCGTCGT CAACACTTGC
GGCTTCATCG ACGAGGCGGT GCAGGAAAGC CTCGACGCGA TCGGCGAAGC GCTCGCCGAA
AACGGCAAGG TGATCGTCAC CGGCTGCCTC GGCGCGAAGA AGAGCGCGAG CGGCTCCGGC
CTCATCGCGG AAGTGCATCC GAAGGTGCTC GCCGTCACGG GCCCGCATGC GGTCGGCGAA
GTGATGCAGG CGGTGCACAG CCATCTGCCG AAGCCGCACG ATCCGTTCGT CGACCTCGTG
CCGGCCGCGG GCATCAAGCT CACGCCGCGT CACTACGCGT ATCTGAAGAT CTCCGAAGGC
TGCAATCACC GCTGCTCGTT CTGCATCATC CCGTCGATGC GCGGCGAGCT CGTGTCGCGG
CCCGTTGCCG AGGTGATGCT CGAAGCCGAG AATCTCTTCA AGTCCGGCGT GAAGGAGCTG
CTCGTGATCT CGCAGGACAC GAGCGCGTAC GGCGTCGACG TCAAGTACCG CACGGGCTTC
TGGAACGGCC GGCCGCTCAA GACGCGGATG ACCGAGCTCG TCGGCGCGCT CGGTGAGCTC
GCCGCGCAGT ACGGCGCGTG GGTGCGCCTG CACTACGTGT ATCCGTATCC GCACGTCGAC
GAGATCATTC CGATGATGGC GCAAGGCCCG CTCAAGGGCC ATGTGCTGCC GTATCTCGAC
GTGCCGTTCC AGCACGCGCA TCCGGAGGTG CTCAAGCGAA TGAAGCGCCT GGCGAACGCG
GAGCGGGTGC TCGAGCGCGT GCAGAAGTGG CGCGAGATCT GCCCGGATCT GACGATTCGC
AGCACGTTCA TTGCCGGCTT TCCGGGCGAG ACCGACGCGC AATTCGAGAC ACTCCTCGAT
TTCATCCGCG AGGCCGAGCT CGATCGCGTC GGCTGCTTCG CGTATTCTCC GGTCGAGGGC
GCGAGCGCGA ACGCGCTCGA CGGCGCGCTG CCCGACGACG TGCGCGAGGC ACGCCGCGCG
CGCTTCATGG AAGTCGCCGA GGAGGTGTCC GCCGCGCGCA TCGCGCGCAA GATCGGCAAG
ACGCTCAAGG TGTTGATCGA CGAGGTCAAC GCGGAAGGCG GCATCGGCCG CACCGCGGCC
GATGCGCCCG AGATCGACGG CGTCGTCTAT GTCGAGCCGG CGGCCAAGGC GTCGAAGCGC
TACAAGGTCG GCGAGTTCGT GTCCGTGAAG ATCACGGGCG CCGACGGCCA CGATCTGTGG
GGCGAGGTCT GA
|
|---|
| Protein sequence | MENSLKSSGK PLAAPKVGMV SLGCPKALVD SEQIITQLRA EGYEISGTYD GADLVVVNTC
GFIDEAVQES LDAIGEALAE NGKVIVTGCL GAKKSASGSG LIAEVHPKVL AVTGPHAVGE
VMQAVHSHLP KPHDPFVDLV PAAGIKLTPR HYAYLKISEG CNHRCSFCII PSMRGELVSR
PVAEVMLEAE NLFKSGVKEL LVISQDTSAY GVDVKYRTGF WNGRPLKTRM TELVGALGEL
AAQYGAWVRL HYVYPYPHVD EIIPMMAQGP LKGHVLPYLD VPFQHAHPEV LKRMKRLANA
ERVLERVQKW REICPDLTIR STFIAGFPGE TDAQFETLLD FIREAELDRV GCFAYSPVEG
ASANALDGAL PDDVREARRA RFMEVAEEVS AARIARKIGK TLKVLIDEVN AEGGIGRTAA
DAPEIDGVVY VEPAAKASKR YKVGEFVSVK ITGADGHDLW GEV
|
|---|
| |