| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMA1263 |
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| Symbol | vacB |
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| ID | 3090063 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia mallei ATCC 23344 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_006348 |
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| Strand | - |
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| Start bp | 1312731 |
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| End bp | 1315169 |
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| Gene Length | 2439 bp |
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| Protein Length | 812 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637561979 |
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| Product | ribonuclease R |
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| Protein accession | YP_102934 |
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| Protein GI | 53723480 |
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| COG category | [K] Transcription |
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| COG ID | [COG0557] Exoribonuclease R |
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| TIGRFAM ID | [TIGR00358] VacB and RNase II family 3'-5' exoribonucleases
[TIGR02063] ribonuclease R |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGCAAGT ATCCGTATCC CATCCCGAGC CGCGAAGAGA TTCTCGGCGT GCTGCGCACG
AGCGACGCGC CGCTTGCGGC GAACGACATC GCCGAAGCGC TGTCGATCAA GCGTCAGGAG
CGCGAGGGAT TTTTCCGGCG CGTCGCCGCG ATGGAGCGCG ACGGCCAGAT CCGTCTCGAC
AAGCGCGGTC ATTATCAGCT GACGCATCCG TCCAACTTCG TCGCGGGCCG CGTGCAAGGC
CACCGCGACG GCTACGGCTT CGTGATTCGC GACGACGGGC AGGATGATCT GTTCCTGCCG
AACGCCGAGA TGCAAAAGGT CATGCACAAC GACCGCGTGC TGGCGCGGAT CGTCGGCTAC
GATCGGCGCG GCCGGCCGGA AGGGCACGTC GTCGAGGTGA CCGAGCGGGC GAACAAGCGC
GTGATCGGGC GCCTCCTGAA CGAGAACGGC GCGCTCATCG TCGCGCCCGA GGACAAGCGG
ATCAGTCACG ACATCCTCGT CACGCAGAAC GCGAAGAAGG CGAAGGTCGG GCAGGTCGTC
GTCGTCGAGC TCACCGATTT CCCGAGCCGT CATTCGCAGC CGCTCGGCCG CGTCTGCGAG
GTGCTCGGCG ATATCGACGA TCCCGGCATG GAGATCGAGA TCGCGGTGCG CAAGTACGGC
GTGCCGCACG AATTCGGCGC GCAAGCGCTC GGCGAGGCCG CGGCGCTGCC GGACAAGGTG
CGGCCCGCGG ATCTGCGCTA CCGCGTCGAC TTGCGCGACG TGCCGCTCGT CACGATCGAC
GGCGAGGACG CGCGCGACTT CGACGACGCC GTGTACTGCG AGCCCGCCGC GGTCGGCCGC
GGCGAGGGCT TCCGGCTCAT CGTCGCGATC GCGGACGTGT CGCACTACGT GCAGCCAGGC
AGCCCGCTCG ACGCCGACGC GGTCGAACGC AGCACGTCGG TCTATTTCCC GCGCCGGGTG
ATTCCGATGC TGCCGGAGAA GCTGTCGAAC GGGCTCTGCT CGCTGAATCC GCAGGTCGAT
CGCTGCGTGC TCGCGTGCGA CATGATCATC AACGCGCGTG GCGACATCAA GGCGTATCAG
TTCTATCCGG CCGTGATCCA CTCGGCCGCG CGGCTCACGT ACACCGAAGT GGCCGCGGTG
CTCTCGAACA CGAAGGGGCC GGAGGCCGCG CGCCGCGCCG AGCTGATGCC GCACCTGCAG
CACCTGTACG GCGTCTACAA GGCGCTCTTC GTCGCGCGGC AGAAGCGCGG CGCGATCGAC
TTCGACACGA CCGAGACGTA CATCGTCTGC AACGCACAGG GCAAGATCGA GCAGATTCTG
CCGCGCCAGC GTAACGACGC GCATCGGCTG ATCGAGGAAT GCATGCTTGC CGCGAACGTC
TGCGCGGCCG ATTTCCTCAA GCGCAACAAG CACCCGGGCC TCTACCGCGT GCACGCGGGG
CCGACGCCCG AAAAGCTCGA GAATCTGCGC GCGTTCCTGC GCGACATGGG GCTCACGCTG
GGCGGCGGCG ACACGCCGCA TGCGAGCGAT TACGCGGCGC TGATGGCGCA CATCCGCGAC
CGGCCCGACG CGCAGATGCT GCAGCCGATG CTGCTGCGCT CGATGCAGCA GGCGGTCTAC
AGTCCGGACA ACATCGGCCA CTTCGGTCTC GCGTACGACG CGTACGCGCA CTTCACGAGC
CCGATTCGCC GCTATCCCGA TCTGCTCACG CACCGCGCGA TCTACGCGAT CCTGTCCGGC
AAGAAGTACA CGCCGAAGTC GCCGGAAGGC GTCGAGCTGA ACACCGCGCT GTCGCCGCGC
GCGCGCGCGA TGCAGCGCGA GGACGACGAG GCGCGCGGCC GCGCGCGGTC GAACGCGGCG
ATCTGGGAGG AGCTCGGGCT GCACTGTTCG TCCAACGAGC GGCGCGCGGA CGAAGCGTCG
CGCGACGTCG AGGCATGGCT CAAGTGCTAT TTCATGCGCG ACAAGCTCGG CGAGGAATAC
GGCGGGATGG TGAACGGCGT CACGTCGTTC GGCATCTTCG TGCAGCTCGA TGCGCTTTTC
ATCGAAGGCC TCGTGCATGT GACCGAGCTC GGCGCCGATT ATTTTCAGTA CGACGAAGTC
AAGAACGAAC TGCGCGGCGA GCGCACGGGC ATTCGCTACC GGCTGTCCGA CCGCGTGCGC
GTGCAGGTGA GCCGCGTCGA TCTCGATGCG CGCAAGATCG ATTTCCGCCT CGTGCGCGAG
ACGCCCGTGA AGGCGCCGCG CCCGGCATCG GCGGTGGCGG CCGAAGCGGG CGCGGGCGGG
CCGCGTGTGC GCGCGCTGCC GCCCGCCGAA GGCGCCGCGC GACGCAAGAA GGCCGCGAGC
GCGCCGAGCG CGGCGGTGAA GGAGGCCCGG GCGGCCCGCA AGAAGGGCGC CGCGTCGAAG
CCGGCCGCGA AGAAGGCGCG TTCGCGCAAG AAGTACTGA
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| Protein sequence | MSKYPYPIPS REEILGVLRT SDAPLAANDI AEALSIKRQE REGFFRRVAA MERDGQIRLD
KRGHYQLTHP SNFVAGRVQG HRDGYGFVIR DDGQDDLFLP NAEMQKVMHN DRVLARIVGY
DRRGRPEGHV VEVTERANKR VIGRLLNENG ALIVAPEDKR ISHDILVTQN AKKAKVGQVV
VVELTDFPSR HSQPLGRVCE VLGDIDDPGM EIEIAVRKYG VPHEFGAQAL GEAAALPDKV
RPADLRYRVD LRDVPLVTID GEDARDFDDA VYCEPAAVGR GEGFRLIVAI ADVSHYVQPG
SPLDADAVER STSVYFPRRV IPMLPEKLSN GLCSLNPQVD RCVLACDMII NARGDIKAYQ
FYPAVIHSAA RLTYTEVAAV LSNTKGPEAA RRAELMPHLQ HLYGVYKALF VARQKRGAID
FDTTETYIVC NAQGKIEQIL PRQRNDAHRL IEECMLAANV CAADFLKRNK HPGLYRVHAG
PTPEKLENLR AFLRDMGLTL GGGDTPHASD YAALMAHIRD RPDAQMLQPM LLRSMQQAVY
SPDNIGHFGL AYDAYAHFTS PIRRYPDLLT HRAIYAILSG KKYTPKSPEG VELNTALSPR
ARAMQREDDE ARGRARSNAA IWEELGLHCS SNERRADEAS RDVEAWLKCY FMRDKLGEEY
GGMVNGVTSF GIFVQLDALF IEGLVHVTEL GADYFQYDEV KNELRGERTG IRYRLSDRVR
VQVSRVDLDA RKIDFRLVRE TPVKAPRPAS AVAAEAGAGG PRVRALPPAE GAARRKKAAS
APSAAVKEAR AARKKGAASK PAAKKARSRK KY
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