Gene BMA1198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMA1198 
SymbolrbsB 
ID3090093 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei ATCC 23344 
KingdomBacteria 
Replicon accessionNC_006348 
Strand
Start bp1262870 
End bp1263802 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content68% 
IMG OID637561922 
Productribose ABC transporter, periplasmic ribose-binding protein 
Protein accessionYP_102879 
Protein GI53723433 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1879] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.106304 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTCGACGC CGGCTTCCGG CCGCCGGGCC GCCCGCGCGC TGCGCGCCGC CGCGCTTTCG 
CTCGCGCTCG GCGCGGCGAG CGCCGCGCAC GCGGCGCCGC TGAAGATCGG CATGACGTTC
CAGGAGCTGA ACAACCCGTA CTTCGTGACG ATGCAAAAGG CGCTCGACGA GGCGGCCGCG
TCGATCGGCG CGCAGGTGAT CGTCACCGAC GCGCATCACG ACGTCAGCAA GCAGGTGAGC
GACGTCGAGG ACATGCTGCA GAAGAAGATC GACATCCTGC TCGTGAACCC GACCGATTCG
ACGGGCATCC AGTCGGCCGT CGTGTCGGCG AAGAAGGCGG GCGCCGTCGT CGTCGCGGTG
GACGCGAACG CGAACGGCCC GGTCGACGCG TTCGTCGGCT CGAAGAATTT CGACGCGGGC
GCGATGTCGT GCGACTACCT CGCGAAGGCG ATCGGCGGCG GCGGCGAAGT CGCGATCCTC
GACGGCATCC CGGTCGTGCC GATTCTCGAG CGCGTGCGCG GCTGCCGCGC GGCGCTCGCG
AAATTCCCGA ACGTGAGGAT CGTCGACGTG CAGAACGGCA GGCAGGAGCG CGCGAGCGCG
CTCGCCGTCA CCGAGAACAT GATCCAGGCG CACCCGTTGC TCAAGGGCAT CTTCAGCGTC
AACGACGGCG GCTCGATGGG CGCGCTGTCC GCGATCGAGG CGTCGGGCCG CGACATCAAG
CTCACGAGCG TCGACGGCGC GCCGGAGGCG ATCGCGGCGA TGCAGAAGCC GAACTCGAAG
TTCATCGAGA CGTCCGCGCA GTTCCCGCGC GACCAGATTC GCCTCGCGAT CGGCATCGGG
CTCGCGAAGA AGTGGGGCGC CAATGTGCCG AAGGCGATTC CGGTCGACGT GAAGCGGATC
GACAAGGGCA ACGCGAAGAC GTTCAGTTGG TGA
 
Protein sequence
MSTPASGRRA ARALRAAALS LALGAASAAH AAPLKIGMTF QELNNPYFVT MQKALDEAAA 
SIGAQVIVTD AHHDVSKQVS DVEDMLQKKI DILLVNPTDS TGIQSAVVSA KKAGAVVVAV
DANANGPVDA FVGSKNFDAG AMSCDYLAKA IGGGGEVAIL DGIPVVPILE RVRGCRAALA
KFPNVRIVDV QNGRQERASA LAVTENMIQA HPLLKGIFSV NDGGSMGALS AIEASGRDIK
LTSVDGAPEA IAAMQKPNSK FIETSAQFPR DQIRLAIGIG LAKKWGANVP KAIPVDVKRI
DKGNAKTFSW