Gene BMA1196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMA1196 
SymbolrbsC 
ID3090196 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei ATCC 23344 
KingdomBacteria 
Replicon accessionNC_006348 
Strand- 
Start bp1260272 
End bp1261276 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content72% 
IMG OID637561920 
Productribose ABC transporter, permease protein 
Protein accessionYP_102877 
Protein GI53723432 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.134964 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATGACC GGACGGCCGC GCCGTCTGCC TCTTGCGCGC CCGCCGCCGC GAGCCCCGCT 
CGGGCCACGG GCCCCGCGCT CGCCGCGCTG CGGCGCTCGA CGACGTTCTA CCCGCTCGTC 
GGGCTCGTCG CCGTGTGCGT CGCGATGGTG TTCGCGAGCG ACAGCTTCCT GAGCGCGGCG 
AACCTCGAGA ACGTGCTGCG GCAGGTGTCG ATCAACGCGA TCATCGGCGT CGGGATGACC 
TGCGTGATCC TGACGGGCGG CATCGACCTG TCGGTCGGCT CGGTGATGGC GCTGTCCGGC 
ACGCTCGCGG CGGGCCTTCT CGTCGCGGGC GCGAACGGCG CGGCGGCGCT TGCCGCGGGC 
ATCGGCGTCG GGGTCGCGCT CGGCGCGGCG AACGGCCTGT TCGTCGCGTT CGCCGGCATG 
CCGCCCATCA TCGTCACGCT CGCGACGATG GGCATCGCGC GCGGCCTCGC GCTCATCTAC 
ACGGGCGGCT ACCCGATCGA CGGGCTGCCC GACTGGGTCC GCTTCTTCGG CAGCGGCAAG 
GTGCTCGGCG TGCAAATGCC CGTGCTGACG ATGCTCGCGG TCTACGCGCT CGCGTGGCTG 
ATGCTCGAGC GCATGCCGTT CGGCCGCTAC GTCTACGCGA TCGGCGGCAA CGAGCACGCG 
ACGCGGCTCT CGGGCGTGCG CGTGTCGCGC GTGAAGCTGG CCGTCTATAC GTTCGCGGGG 
CTCACGTCCG CGCTCGCCGC GCTCGTGCTG ACGGGCCGCC TGATGAGCGG GCAGCCGAAC 
GCGGGGGGCG GCTTCGAGCT CGACGCGATC GCCGCCGTCG TGATGGGCGG CACGTCGATC 
GCGGGCGGCC GCGGCTCGAT CGTCGGCACG CTTGTCGGCG CGCTGCTGCT CGGCGTGCTG 
AACAACGGCC TGAACATGAT CGGCGTGAAT CCCTACGTGC AGAACGTGAT CAAGGGCGCC 
ATCATCCTGC TCGCGATCTA CATCGGCCGC GAGCGCCGCA CGTGA
 
Protein sequence
MHDRTAAPSA SCAPAAASPA RATGPALAAL RRSTTFYPLV GLVAVCVAMV FASDSFLSAA 
NLENVLRQVS INAIIGVGMT CVILTGGIDL SVGSVMALSG TLAAGLLVAG ANGAAALAAG 
IGVGVALGAA NGLFVAFAGM PPIIVTLATM GIARGLALIY TGGYPIDGLP DWVRFFGSGK 
VLGVQMPVLT MLAVYALAWL MLERMPFGRY VYAIGGNEHA TRLSGVRVSR VKLAVYTFAG 
LTSALAALVL TGRLMSGQPN AGGGFELDAI AAVVMGGTSI AGGRGSIVGT LVGALLLGVL 
NNGLNMIGVN PYVQNVIKGA IILLAIYIGR ERRT