Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMA1178 |
Symbol | |
ID | 3090725 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei ATCC 23344 |
Kingdom | Bacteria |
Replicon accession | NC_006348 |
Strand | - |
Start bp | 1225935 |
End bp | 1228160 |
Gene Length | 2226 bp |
Protein Length | 741 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637561903 |
Product | TonB-dependent siderophore receptor |
Protein accession | YP_102860 |
Protein GI | 53723401 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0776508 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGGAGCAAC GGAAGATGGA GTGGGCAACC AGCACGCGCG TGCGTGCGAT CGCGGCCGGC GTGGCGTTCT ACGCGGCGGC GGCGGGTCAT GCGCAGGCAC AGGCGGCGCA GCCGGGGGCG GACGCGCGGC AGCCGGGCGG CGAGGCGAAG GCAGACACCG CGGCGGGCGG CACGTTGCCC GCGATCTCGG TGTCGGGAGC AGCGGAGCGC GACGCGAGCG TCGGCCTCGT CGCGCGGCGC AGCATGACGG GCACGAAAAC GGATACGCCG ATCATCGAGA TTCCACAGAC GATCAACGTC GTCACCGCGC AGCAGATCGA GGCGACGGGC GCGACCGACA TCAATCAGGC GTTCCGCTAC ATTCCGGGCT TCTCGAGCTA CGGGTCGGAC AACCGTTCGG ACTGGTACGC GGCGCTGCGC GGCTTCACGC CGACCGTGTT CGTCGACGGG CTGCAGGTGC CGAACACGAT CAACCTGTCG AGCTGGCGCG TCGATCCGTA CATGATCGAC AGCATCGCCG TGCTGCGCGG CCCGACGTCG GTGCTGTACG GGCAGGGCGA TCCCGGCGCG ATCGTCGACG TGCAGAGCAA GCTCGCGAAC GGCGAGCGCA TCCGCGAGCT CGGCGTGCAG GTCGGCAACT ACGCGCGCAA GCAACTGATG TTCGACATCG GCGACACGAT CGGCAAGGAC GGCACGCTGT CGTACCGGAT CGTCGGCGTC GGCCGCGACG GCAACGCGCA GACGGGGCCG CTCGCCGACC AGCGCGTGTC GTTCGCGCCG TCGCTCAAAT GGCAGCCGAA CGCGGACACG TCGCTCACCC TCGCCGCGAC GTACCTGCAG GACTGGGGGG ACACGTCGAG CAACTTCCTG CCGTCGCGCG GCACCGTGCT GCCGAATCCG AACGGCACGA TCTCGGACGA CCTGTACACG GCCGATGCGA ACTTCGACCA TTACCGCAAG AAGCAGTGGT CGCTCGGCTA TCAGTTCGAG CACAAGCTGA ACCCGGTGTG GACGCTGCGG CAGAACGTGC GCTGGATGCA CCTGTCGCTC GACGACGCGT CCGTCTACGG CGGCGGCCTC GACGACGCAG ACCCGACGAT GGCGACGATG ACGCGCTACG CGGGCCTGTT CCAGTTCAAC TACAGCCGCT TCGACGTCGA CAACCAGGCG CAGGCGAAAT TCACGACGGG CCCGCTTTCG CACACGCTGC TGTTCGGCTT CGACTACAAC CGCCAGACGA CGACCGATAG CGAATGGCTC GCGAAGGGGC CGAGCCTGAA CCTGTACCGG CCCGTCTACA CGCCGATTCC GTCCGACATC TTCAGCGGGC CGAACGCGTC GCGCACCGAC ACGAAGACGA CGCTGAACGC ATTCGGCCTG TACGTGCAGG ACCAGATCAA GTGGCGGCGC TGGGTGCTCA CGCTCGGCGG CCGGCAGGAC TGGACGCGCA CGTCGCAGGA CGACATCGCG AACGCGGCGA GCTTCAGGCA GAACGACCAC GCGTTCAGCG GGCGCGTGGG CCTCACGTAT CTCGGCGACT ACGGGCTCGC GCCGTACCTC AGCTATTCGA CGTCGTTCAA TCCGCAGATC GGCCTGAAGC TCGCGGGCGG CGGGCTCGCG ACGCCGACCA AGGGCCGCCA GATCGAGGCG GGCCTGCGCT GGCAGCCGCC CGGCAAGAAC CTGATGCTGA ACGCGGCCGT CTACCAGATC AACCAGACGA ACGTCGCGAT GAGCAATCCG AACGACCCGA CGAGCAGCAC GTTCGTGCAG GTGGGCGAGG TGCGCTCGCG CGGCGTCGAG CTGAGCGCGG TGGGCAACCT GTCGCGCGAG CTGTCGGTGA TCGCCGCGTA CGTCTATCAG GACGTGAAGA ACGTGCGGGC GAACGACAAC ACGCTGAACA AGTGGCCCGT CGACGTGCCG CGGCCGCGCC AGATCGCGTC GCTGTGGGCC GACTGGACGT GGCGCACCGG GCCGCTCACG GGCTTCGGCG TCGGCGCGGG CGTGCGCTAC ATGAGCGCGG CGGCGGGCGC GGTCGACAAT TCGCTCACGG TGCCGAGCTA CACGCTGTTC GACGCGGCGC TGCACTACGA GCTGCGCAAC TGGCGTTTCG CGCTCAACGC GACGAACCTG TTCAACCGCC GCTACGTGGC CGGCTGCCAG TCGGATGCGG TGTGCATGTA CGGCAACCAG CGCACCGTGA TCGCGACCGC GAAATACAAC TGGTAA
|
Protein sequence | MEQRKMEWAT STRVRAIAAG VAFYAAAAGH AQAQAAQPGA DARQPGGEAK ADTAAGGTLP AISVSGAAER DASVGLVARR SMTGTKTDTP IIEIPQTINV VTAQQIEATG ATDINQAFRY IPGFSSYGSD NRSDWYAALR GFTPTVFVDG LQVPNTINLS SWRVDPYMID SIAVLRGPTS VLYGQGDPGA IVDVQSKLAN GERIRELGVQ VGNYARKQLM FDIGDTIGKD GTLSYRIVGV GRDGNAQTGP LADQRVSFAP SLKWQPNADT SLTLAATYLQ DWGDTSSNFL PSRGTVLPNP NGTISDDLYT ADANFDHYRK KQWSLGYQFE HKLNPVWTLR QNVRWMHLSL DDASVYGGGL DDADPTMATM TRYAGLFQFN YSRFDVDNQA QAKFTTGPLS HTLLFGFDYN RQTTTDSEWL AKGPSLNLYR PVYTPIPSDI FSGPNASRTD TKTTLNAFGL YVQDQIKWRR WVLTLGGRQD WTRTSQDDIA NAASFRQNDH AFSGRVGLTY LGDYGLAPYL SYSTSFNPQI GLKLAGGGLA TPTKGRQIEA GLRWQPPGKN LMLNAAVYQI NQTNVAMSNP NDPTSSTFVQ VGEVRSRGVE LSAVGNLSRE LSVIAAYVYQ DVKNVRANDN TLNKWPVDVP RPRQIASLWA DWTWRTGPLT GFGVGAGVRY MSAAAGAVDN SLTVPSYTLF DAALHYELRN WRFALNATNL FNRRYVAGCQ SDAVCMYGNQ RTVIATAKYN W
|
| |