Gene BMA1139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMA1139 
Symbol 
ID3089743 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei ATCC 23344 
KingdomBacteria 
Replicon accessionNC_006348 
Strand
Start bp1180234 
End bp1181394 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content75% 
IMG OID637561867 
ProductABC transporter, permease protein 
Protein accessionYP_102824 
Protein GI53723408 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1174] ABC-type proline/glycine betaine transport systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00529998 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCGCGT GGGCCGCGCG CGTCGACAAG GTCGGCGTGC TGATCGCCGC GCTCGTCGCG 
TACGCGGCGT TCGTGCTGCC GTTCGTCACG CTGCGCGCGA ACCGGATCGC GGCGGGCGCG
GAGCTCGCGC CCGCCGCGGT GTTTCCGGCG CTCCACGCGT ACGCGCTCGA CGCGCTGTGG
GCGGCGGGCG CGCTGTTCGC GCTCGTGCGC AGCCGCGCGG CATGGCGCGC GGCCGTCGGC
GTCGGGCTCG TGTTCGCGCT GGGCGTGGCG ATCGGCGCGG CGCCCGCGCA TCTCGTCACG
CCGGATACGC CGCTCGCGCG CGTGTCGCCC GCGGCGGGCG CGTGGCTGCT GCTGTTCGCG
TTCGCGGTGC TGATCGCCGA CGCGCTCGCC CGGATCGCGC TCGCGCCCGC GATGCGCCTC
GTCGCGCTCG CCGCGGCGAG CGCCGCGCTC GCGGCATTCA TTCACGGCGG CTTCTGGGAC
GGGCTGTCGG TGATGCAGGA ATACGCGGTG TGCGCCGATA CGTTCCGCAA CGAGGCGATC
CGGCATCTCG CGCTCGTCGC CGGCTCGGTG GCGGCGGCCG TCGCGCTCGG CGTGCCGCTC
GGCATCGGCT GCACGCGCTC GGCCGCGCTG CGCGGCGCGT TGCTGCCGCT GCTGAACGTC
GTGCAGACGA TCCCGAGCAT CGCGCTGTAC GGCCTGCTGA TGGCGCCGCT CGCGATCCTC
GCCGCGCGCG TGCCGCTCGC CGCCCGCCTC GGCGTGAGCG GCATCGGCGT CGCGCCCGCG
CTGATCGCCC TGTTCCTGTA TGCGCTGCTG CCGATCGTGT CGAGCGTCGT CGTCGGCTTC
GCGCAGGTGC CCGCCGCCGT CGTCGAGGCC GCGCTCGCGA TGGGGATGAC GGGCCGCGAG
CGGCTCGTCG CGATCGAGCT GCCGCTCGCG CTGCCCGTCG TGCTTTCCGG CGTGCGCATC
GTGCTCGTGC AGAACATCGG CCTCACGGCC GTCGCCGCGC TGATCGGCGG CGGCGGCTTC
GGCACGTTCA TCTTCCAGGG GATCGGCCAG TCGGCGACCG ATCTCGTGCT GCTCGGCGCG
CTGCCGACGA TCGCGCTCGC GCTCGTCACC GCCGTGCTGT TCGAGGCCGC GACCGACCTA
GCGAAAGGAG CGCGCCGATG A
 
Protein sequence
MPAWAARVDK VGVLIAALVA YAAFVLPFVT LRANRIAAGA ELAPAAVFPA LHAYALDALW 
AAGALFALVR SRAAWRAAVG VGLVFALGVA IGAAPAHLVT PDTPLARVSP AAGAWLLLFA
FAVLIADALA RIALAPAMRL VALAAASAAL AAFIHGGFWD GLSVMQEYAV CADTFRNEAI
RHLALVAGSV AAAVALGVPL GIGCTRSAAL RGALLPLLNV VQTIPSIALY GLLMAPLAIL
AARVPLAARL GVSGIGVAPA LIALFLYALL PIVSSVVVGF AQVPAAVVEA ALAMGMTGRE
RLVAIELPLA LPVVLSGVRI VLVQNIGLTA VAALIGGGGF GTFIFQGIGQ SATDLVLLGA
LPTIALALVT AVLFEAATDL AKGARR