Gene BMA1138 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMA1138 
Symbol 
ID3090716 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei ATCC 23344 
KingdomBacteria 
Replicon accessionNC_006348 
Strand+ 
Start bp1179239 
End bp1180177 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content68% 
IMG OID637561866 
ProductABC transporter, periplasmic glycine/betaine-binding protein, putative 
Protein accessionYP_102823 
Protein GI53723407 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1732] Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.00620206 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTTC CCCGTTTCAG CCGTACCCTG CGCGCGGCCG CCGCCGCGCT CGCCGTTTCC 
CTCTGCGCGG CCGCGCCCGG CGCGCGCGCC GCCGGCGCGG TCACCGTCGC GTCGAAGATC 
GATACCGAAG GCAACCTGCT CGGCAACGTG ATCTCGCAGG TGCTCAAGGC CCACGGAATC 
GCCGTCGTCG ACAAGATCGG GCTCGGCGCG ACGCCGATCG TCCGCCGGGC GCTGACGACA 
GGCGAAATCG ACATCTACCC GGAATACACG GGCAACGCCG CGTTCTTCTT CAACAAGGCC 
GACGATCCCG CGTGGAAGAA CGCCGCGCAA GGCTACGCGC TCGCCAGGCA GCTCGATTAC 
GCGGCAAACC GGATCGTCTG GCTCGCGCCC GCGCCCGCGA ACAACACATG GGGTGTCGCG 
GTGCTCAACT CGATCGCGCA GGCGCGGCAT CTGAAGACGT TCAGCGATTT CGGCAAGTGG 
GTCGCCGCGG GCGGCAAGGT GAAGCTCGCC GCGTCGGCCG AGTTCGTCAA CAGCGCATCC 
GCGCTGCCGT CGTTCGAGAA GGCGTACGGC TTCAAACTGA AGCCGGAGCA GATGCTCGTG 
CTGTCGGGCG GCGACACCGC GGCGACGATC AAGGCCGCCG CGCAGCAGAC GGACGGCGTG 
AACGCCGCGA TGGTCTATGG CACCGACGGC GGCATCGCGG CCACCGGGCT CGCGGTGCTC 
GACGACGACA AGCACGTGCA GCCCGTCTAC GCGCCCACGC CGATCATCCG CGAGGCGGTG 
CTCAACGCGC ATCCGCAGAT CGCCGACTAC CTGAAGCCCG TGTTCGCGAG CCTCGACCTG 
AAGACGCTGC AAGCGCTCAA CGCGCGAATC CAGATCAACG GCGAGCCGGC CGCGGGCGTC 
GCGGCGAGCT ATCTGAAAGC GAAGGGCTTC GTCAAATGA
 
Protein sequence
MKVPRFSRTL RAAAAALAVS LCAAAPGARA AGAVTVASKI DTEGNLLGNV ISQVLKAHGI 
AVVDKIGLGA TPIVRRALTT GEIDIYPEYT GNAAFFFNKA DDPAWKNAAQ GYALARQLDY 
AANRIVWLAP APANNTWGVA VLNSIAQARH LKTFSDFGKW VAAGGKVKLA ASAEFVNSAS 
ALPSFEKAYG FKLKPEQMLV LSGGDTAATI KAAAQQTDGV NAAMVYGTDG GIAATGLAVL 
DDDKHVQPVY APTPIIREAV LNAHPQIADY LKPVFASLDL KTLQALNARI QINGEPAAGV 
AASYLKAKGF VK