Gene BMA1115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMA1115 
Symbol 
ID3088477 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei ATCC 23344 
KingdomBacteria 
Replicon accessionNC_006348 
Strand
Start bp1157000 
End bp1157779 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content67% 
IMG OID637561846 
Productshort chain dehydrogenase 
Protein accessionYP_102803 
Protein GI53725268 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00652763 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCCGTT CGATCAATCT GGAGGGCAAG GTCGCGCTGA TCACGGGCGC GTCGAGCGGG 
CTCGGGCAGC GTTTCGCGCA GGTGCTGTCG CAGGCGGGCG CGAAGGTCGT GCTCGCGAGC
CGGCGCGTCG AGCGCCTGAA GGAGCTGCGC GCGGAAATCG AGGCGGCGGG CGGCGCCGCG
CATGTGGTGT CGCTCGACGT CACCGATTAT CAGAGCATCC GGGCGGCTGT TGCGCACGCC
GAAACGGAAG CGGGCACGAT AGACATTCTC GTCAACAATT CGGGCGTGTC GACGATGCAG
AAGCTCGTCG ACGTGAGCCC CGCCGATTTC GAGTACGTGT TCGATACGAA CACGCGCGGC
GCGTTCTTCG TCGCGCAGGA AGTCGCCAAG CGAATGATGA TGCGCGCGGG CAGCGGCAAC
GCGAAGCCGG CCTGCCGGAT CATCAACATC GCGTCGGTCG CCGGGCTGCG GCCGTTCTCG
CAGATCGGCC TCTATGCGAT GAGCAAGGCG GCCGTCGTCC ACATGACGCG GGCGATGGCG
CTCGAATGGG GCCGCCACGG CATCAACGTC AACGCGATCT GCCCCGGCTA CATCGACACC
GAGATCAATC ACTATCTATG GGAAACCGAG CAGGGCCAGA AGCTGCAGTC GATGCTGCCG
CGCCGGCGCG TCGGCAAGCC GCAGGATCTC GACGGGCTGC TGCTGCTGCT CGCCGCCGAC
GAGTCGCAGT TCATCAACGG CTCGATCGTG TCGGCCGACG ACGGCCTCGG GCTCGCGTGA
 
Protein sequence
MGRSINLEGK VALITGASSG LGQRFAQVLS QAGAKVVLAS RRVERLKELR AEIEAAGGAA 
HVVSLDVTDY QSIRAAVAHA ETEAGTIDIL VNNSGVSTMQ KLVDVSPADF EYVFDTNTRG
AFFVAQEVAK RMMMRAGSGN AKPACRIINI ASVAGLRPFS QIGLYAMSKA AVVHMTRAMA
LEWGRHGINV NAICPGYIDT EINHYLWETE QGQKLQSMLP RRRVGKPQDL DGLLLLLAAD
ESQFINGSIV SADDGLGLA