Gene BMA1108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMA1108 
Symbol 
ID3088476 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei ATCC 23344 
KingdomBacteria 
Replicon accessionNC_006348 
Strand
Start bp1150541 
End bp1151245 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content65% 
IMG OID637561841 
Product3-oxoadipate CoA-succinyl transferase alpha subunit 
Protein accessionYP_102798 
Protein GI53725273 
COG category[I] Lipid transport and metabolism 
COG ID[COG1788] Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit 
TIGRFAM ID[TIGR02429] 3-oxoacid CoA-transferase, A subunit 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.356707 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAAAG TCTACCCAAG CGCGGCTGCC GCGCTCGAGG GCGTCGTCCA TGACGGGCAG 
ACCTTCGCGG TCGGCGGCTT CGGCCTGTGC GGCATTCCGG AAGCGCTCAT CGCCGCGCTG
CGCGATTCGG CGGTGAAGGG CATCACCTGC ATCAGCAACA ACGCGGGGGT TGACGGCTTC
GGCCTTGGCC TGCTGCTCGA AACCCGGCAA ATCAAGAAGA TGATCTCGTC GTACGTCGGC
GAGAACAAGG AGTTCGAACG CCAGTATCTG TCGGGCGAAC TCGAGCTCGA GTTCACGCCG
CAGGGCACGC TCGCGGAGAA GCTGCGCGCG GGCGGCGCGG GCATCCCGGC GTTCTTCACG
CAGACGGGCT ACGGCACCGT GATCGCCGAA GGCAAGGAGA CGCGCGAGTT CGACGGCAAG
CATTACGTGC TCGAGCCGTC GCTCACGGCG GACGTCGCGC TCGTGAAGGC TTGGAAAGCC
GACAAGTCGG GCAACCTGGT TTACCGGCGC ACCGCGCGCA ACTTCAATCC GATGTGCGCG
ATGGCGGGCC GGATCACGAT CGCCGAGGTC GAGGAGATCG TCGAGAACGG CGAGCTCGAT
CCGGATGCGA TCCACACGCC CGGCATTTTC GTGCAGCGGC TCGTGCTCAA CGCGACGCCG
GAAAAACGCA TCGAACAACG CGTCGTGCGC GCGAAAGGAG ACTGA
 
Protein sequence
MNKVYPSAAA ALEGVVHDGQ TFAVGGFGLC GIPEALIAAL RDSAVKGITC ISNNAGVDGF 
GLGLLLETRQ IKKMISSYVG ENKEFERQYL SGELELEFTP QGTLAEKLRA GGAGIPAFFT
QTGYGTVIAE GKETREFDGK HYVLEPSLTA DVALVKAWKA DKSGNLVYRR TARNFNPMCA
MAGRITIAEV EEIVENGELD PDAIHTPGIF VQRLVLNATP EKRIEQRVVR AKGD