Gene BMA1105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMA1105 
Symbol 
ID3088520 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei ATCC 23344 
KingdomBacteria 
Replicon accessionNC_006348 
Strand+ 
Start bp1147654 
End bp1148742 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content72% 
IMG OID637561838 
Productpolysaccharide deacetylase family protein 
Protein accessionYP_102795 
Protein GI53725282 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0726] Predicted xylanase/chitin deacetylase 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.253343 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGACG CGGCCGGCGC ACCGGCCGCT TCATTCGCGC CCGAGCGGCG CGCGTTCCTG 
GCCCGTGCGA GTGGCGGGCT CGGCCTCGCG GCGGCCGGGC TCGCGCTCGG CGCGGCAGCG 
GCGCCGGGCC GGGCGCTCGC GGCCGGCGCC ACGGCCACCG CCGATACCGG CGCGGCGTCA 
CCCGCCGGCG GCTCGCCGCG GCGCTCCCCC GCCGACGAGC CCGAGGCGGC GCACGGCGCG 
TTCTGGCCGA ACGGCGCGCG GCTCGTGATC TCGATCTCGA TGCAGTTCGA GGCGGGCGGC 
CAGCCGCCGA CGGGCGCCGA CAGCCCGTTC CCGCCCGTCG ACTTTCCGCC GCAGGTGCCC 
GTCGATCTCG CGTCCGCGAC GTGGTTCGCC TACGGCTATC GCGAAGGCAT CCCGCGCATG 
CTCGATTTGT GGGACCGGCA CGGCGTGAAG GTCACCTCGC ACATGATCGG CGAGGCCGTG 
CACCGCCGGC CGGATCTCGC CCGAGAGATC GTCGCGCGCG GCCACGAGGC GGCCGGACAC 
GGGCCGCGCT GGAGCGCGCA GTACGCACTC CCCCGCGACG AAGAGCGGCG CTTCCTGATC 
GCCGCCCGCG AGATGGTCGA AACCGCGACG GGCACGCGGC CCGTCGGCTA CAACTGCAAC 
TGGCTCAGAC GCGGGCCGAA CACACTGCCG CTGTTGCAGG AGCTCGGCTA CCTGTACCAC 
ATCGACGACG TGAGCCGCGA CGAGCCGTTC ATCGAGCAGG TGAACGGCCA GGATTTCGTC 
GTCGTGCCCT ACACGCTGCG CAACAACGAC ATCCTGCTGA TCGAAGGCCG CAACTATTCG 
CCCGGGCAAT TCCTCGAGCA GATCAAGCTC GACTTCGATC AGTTGTACGA CGAAGCCGCC 
ACGCGGCGGC GCATGATGTC GATCAGCGCG CACGACCGGA TCAGCGGCAC GCCGCAGATG 
GTGCGCGCGT GGGACGCGTT CCTGCGCTAC GCGCAATCGC ATCCGGGCGT CGCGTTCATG 
CGCAAGGACG ACATCGCCCG CCATGCACGG CGCAGCCCGC TCACGCTGCG CGAACCCGAA 
ACCCTCTGA
 
Protein sequence
MSDAAGAPAA SFAPERRAFL ARASGGLGLA AAGLALGAAA APGRALAAGA TATADTGAAS 
PAGGSPRRSP ADEPEAAHGA FWPNGARLVI SISMQFEAGG QPPTGADSPF PPVDFPPQVP 
VDLASATWFA YGYREGIPRM LDLWDRHGVK VTSHMIGEAV HRRPDLAREI VARGHEAAGH 
GPRWSAQYAL PRDEERRFLI AAREMVETAT GTRPVGYNCN WLRRGPNTLP LLQELGYLYH 
IDDVSRDEPF IEQVNGQDFV VVPYTLRNND ILLIEGRNYS PGQFLEQIKL DFDQLYDEAA 
TRRRMMSISA HDRISGTPQM VRAWDAFLRY AQSHPGVAFM RKDDIARHAR RSPLTLREPE 
TL