Gene BMA1057 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMA1057 
Symbol 
ID3088187 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei ATCC 23344 
KingdomBacteria 
Replicon accessionNC_006348 
Strand
Start bp1104881 
End bp1106116 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content68% 
IMG OID637561797 
Productmultidrug resistance protein, putative 
Protein accessionYP_102756 
Protein GI53724829 
COG category[V] Defense mechanisms 
COG ID[COG1566] Multidrug resistance efflux pump 
TIGRFAM ID[TIGR00998] efflux pump membrane protein (multidrug resistance protein A) 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0394345 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGACC CTCAACAAAA CGCAGCGCCC GCGCAGCCGC AGAACAACGG CAAGCGCAAG 
CGGATGATGA CGCTGCTCGT CGTGGTGATC GCGATCGCCG CGATCGCATA CGGCCTTTAT
TACCTGCTCG TCGCGCGCTT TCACGAAACC ACCGATGACG CCTACGTGAA CGGCAACGTC
GTGCAGATCA CCCCGCAGGT GACGGGCACC GTGATCGCGG TGAAGGCGGA CGACACGCAG
ACCGTGAAGT CGGGCGACCC GCTCGTCGTG CTCGATCCGG CCGATTCGCA GGTCGCGCTG
CAGCAGGCCG AGGCGAATCT CGCGCAGACG GTGCGCCAGG TGCGCGGCCT CTATGTGAAC
GACGATCAGT ACCGCGCGCA GGTCGCGCTG CGCCAGTCGG ATCTGTCGAA GGCGCAGGAC
GATCTGCGCC GCCGGCTCGC CGTCGCGCAG ACGGGCGCCG TCTCGCAGGA AGAAATCTCG
CACGCGCGCG ACGCGGTGAA GGCCGCGCAG GCATCGCTCG ACGCCGCCGG TCAGCAGCTC
GCGTCGAACC GCGCGCTCAC CGCGAACACG ACCGTCGCCG ACCACCCGAA CGTGCTCGCC
GCCGCCGCGA AGGTCCGCGA CGCCTACCTG AACAATGCGC GCAACACGCT GCCCGCGCCC
GTCACGGGCT ACGTCGCGAA GCGCTCGGTG CGGGTGGGCC AGCGCGTGTC GCCGGGCACG
CCGCTGATGT CGGTCGTGCC GCTGAACGCC GTGTGGGTCG ACGCGAACTT CAAGGAAGTG
CAGTTGAAGC ACATGCGGAT CGGCCAGCCG GTGGAACTGA CGGCCGACAT CTACGGCTCG
TCGGTCAAAT ACCACGGCAA GGTCATCGGC TTCTCGGCGG GCACGGGCGC GGCGTTCTCG
CTGCTGCCGG CGCAGAACGC GACGGGCAAC TGGATCAAGG TCGTCCAGCG CCTGCCGGTG
CGCGTCGAGC TCGATCCGAA GGAACTGAAG GAGCACCCGC TGCGCATCGG CCTGTCGATG
CAGGTCGATG TCGACATCAA GGACGAAAGC GGCAACCAGC TCGGCAACGT GCAGAACACC
GTCTACGAAA CCGACGTGTT CGCGAAGTAC GGCGACGAGG CGGACGCCGA GATCGCTCGC
ATCATCGCGC AGAACGCGGG CGGCGGCGCG GCGGGCGGCG CGAGCGCGCC CACGCCGGCG
GCGAAGCTCG TCGGCCGCGC GTCGAACCTG ATGTAA
 
Protein sequence
MSDPQQNAAP AQPQNNGKRK RMMTLLVVVI AIAAIAYGLY YLLVARFHET TDDAYVNGNV 
VQITPQVTGT VIAVKADDTQ TVKSGDPLVV LDPADSQVAL QQAEANLAQT VRQVRGLYVN
DDQYRAQVAL RQSDLSKAQD DLRRRLAVAQ TGAVSQEEIS HARDAVKAAQ ASLDAAGQQL
ASNRALTANT TVADHPNVLA AAAKVRDAYL NNARNTLPAP VTGYVAKRSV RVGQRVSPGT
PLMSVVPLNA VWVDANFKEV QLKHMRIGQP VELTADIYGS SVKYHGKVIG FSAGTGAAFS
LLPAQNATGN WIKVVQRLPV RVELDPKELK EHPLRIGLSM QVDVDIKDES GNQLGNVQNT
VYETDVFAKY GDEADAEIAR IIAQNAGGGA AGGASAPTPA AKLVGRASNL M