Gene BMA1053 details

Gene Information

• Locus tag: BMA1053
• Symbol: typA
• ID: 3090848
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia mallei ATCC 23344
• Kingdom: Bacteria
• Replicon accession: NC_006348
• Strand: -
• Start bp: 1100601
• End bp: 1102427
• Gene Length: 1827 bp
• Protein Length: 608 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 637561793
• Product: GTP-binding protein TypA
• Protein accession: YP_102752
• Protein GI: 53724833
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG1217] Predicted membrane GTPase involved in stress response
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR01394] GTP-binding protein TypA/BipA

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCCGCG CCCTTCGCAA CATCGCCATC ATCGCCCACG TCGACCACGG CAAGACGACG 
CTCGTCGACC AACTGCTTCG CCAGTCCGGC ACCTTCCGCG AGAACCAGCA GGTCGCCGAG 
CGGGTGATGG ACTCGAACGA CATCGAAAAG GAGCGCGGGA TCACGATCCT CGCGAAGAAC 
TGCGCGGTCG AATACGAGGG CACGCACATC AACATCGTCG ACACGCCCGG GCACGCGGAC 
TTCGGCGGCG AAGTGGAGCG CGTGCTGTCG ATGGTCGACT CGGTGCTGCT GCTCGTCGAC 
GCGGTCGAGG GCCCGATGCC GCAGACCCGC TTCGTGACGA AGAAGGCGCT CGCGCTCGGC 
CTGAAGCCGA TCGTCGTGAT CAACAAGATC GACCGCCCGG GCGCACGCAT CGACTGGGTG 
ATCAACCAGA CCTTCGACCT GTTCGACAAG CTCGGCGCGA CCGAGGAGCA GCTCGATTTC 
CCGATCGTCT ACGCGTCGGG CCTGAACGGC TACGCGTCGC TCGATCCGGC CGCGCGCGAC 
GGCGACATGC GTCCGCTCTT CGAGGCGATC CTCCAGCACG TGCCGGTTCG CCCGGCCGAC 
CCGGACGCGC CGCTGCAACT GCAGATCACC TCGCTCGACT ATTCGACGTA CGTCGGCCGC 
ATCGGCGTGG GCCGCATCAC GCGCGGGCGC ATCAAGCCGG GCCAGCCGGT CGTGATGCGC 
TTCGGTCCGG AAGGCGACGT GCTCAACCGC AAGATCAACC AGGTGCTGTC GTTCCAGGGG 
CTCGAGCGCG TGCAGGTGGA CTCGGCCGAG GCGGGCGACA TCGTCCTCAT CAACGGCATC 
GAAGACGTCG GCATCGGCGC GACGATCTGC GCGGTGGAGG CGCCCGAAGC GCTGCCGATG 
ATCACCGTCG ACGAGCCGAC GCTGACGATG AACTTCCTCG TCAATTCGTC GCCGCTCGCC 
GGCCGCGAAG GCAAGTTCGT GACGAGCCGC CAGATCCGCG ATCGCCTGAT GAAGGAGCTG 
AACCACAACG TCGCGCTGCG CGTGAAGGAT ACCGGCGACG AAACGGTGTT CGAGGTGTCG 
GGCCGCGGCG AGCTGCACCT GACGATCCTG GTCGAGAACA TGCGCCGCGA GGGCTACGAG 
CTCGCCGTGT CGCGTCCGCG CGTCGTGATG CAGGAGATCG ACGGCGTGAA ACACGAGCCG 
TACGAGCTGC TGACGGTCGA CCTCGAGGAC GAGCACCAGG GCGGCGTGAT GGAGGAGCTC 
GGCCGCCGCA AGGGCGAAAT GCTCGACATG GTGTCCGACG GGCGCGGCCG CACGCGTCTC 
GAGTACCGGA TTCCGGCGCG CGGCCTGATC GGCTTCCAGA GCGAGTTCCT GACGCTCACG 
CGCGGCACGG GCCTGATGAG CCACATCTTC GATTCGTACG CGCCCGTCAA GGAAGGCTCG 
GTCGGCGAGC GCCGCAACGG CGTGCTGATC TCGCAGGACG ACGGCGCTGC GGTGGCATAC 
GCGCTGTGGA AGCTGCAGGA TCGCGGCCGC ATGTTCGTGA AGCCGGGCGA TGCGCTTTAC 
GAGGGCATGA TCATCGGCAT TCACAGCCGC GACAACGACC TCGTCGTGAA CCCGATCAAG 
GGCAAGCAAC TGACCAACGT GCGCGCGTCG GGCACCGACG AAGCGGTGCG CCTCGTGCCG 
CCGATCCAGA TGTCGCTCGA ATACGCGGTC GAATTCATCG ATGACGACGA GCTCGTCGAA 
GTGACGCCGC AGTCGATCCG CCTGCGCAAG CGCCACCTGA AGGAGCACGA GCGCCGCCGC 
GCGAGCCGCG AGGCCGAGGC CGGCTGA 

 

Protein sequence

MTRALRNIAI IAHVDHGKTT LVDQLLRQSG TFRENQQVAE RVMDSNDIEK ERGITILAKN 
CAVEYEGTHI NIVDTPGHAD FGGEVERVLS MVDSVLLLVD AVEGPMPQTR FVTKKALALG 
LKPIVVINKI DRPGARIDWV INQTFDLFDK LGATEEQLDF PIVYASGLNG YASLDPAARD 
GDMRPLFEAI LQHVPVRPAD PDAPLQLQIT SLDYSTYVGR IGVGRITRGR IKPGQPVVMR 
FGPEGDVLNR KINQVLSFQG LERVQVDSAE AGDIVLINGI EDVGIGATIC AVEAPEALPM 
ITVDEPTLTM NFLVNSSPLA GREGKFVTSR QIRDRLMKEL NHNVALRVKD TGDETVFEVS 
GRGELHLTIL VENMRREGYE LAVSRPRVVM QEIDGVKHEP YELLTVDLED EHQGGVMEEL 
GRRKGEMLDM VSDGRGRTRL EYRIPARGLI GFQSEFLTLT RGTGLMSHIF DSYAPVKEGS 
VGERRNGVLI SQDDGAAVAY ALWKLQDRGR MFVKPGDALY EGMIIGIHSR DNDLVVNPIK 
GKQLTNVRAS GTDEAVRLVP PIQMSLEYAV EFIDDDELVE VTPQSIRLRK RHLKEHERRR 
ASREAEAG