| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMA1022 |
|---|
| Symbol | |
|---|
| ID | 3088435 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei ATCC 23344 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_006348 |
|---|
| Strand | + |
|---|
| Start bp | 1068735 |
|---|
| End bp | 1069505 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637561771 |
|---|
| Product | fimbrial chaperone protein |
|---|
| Protein accession | YP_102730 |
|---|
| Protein GI | 53724854 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.490389 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCTGC CTACCGTTTG TCATGCCGCT TTTACCGCCG TCCTCGCCCT GTGCGGCACC
GCAGCCCACG CGGGTATCCA GGTAGGCGGC ACACGCGTGG TTTTCGACGC GAAAGTCGAT
GTGCGCGATG CATCGGTTGC CGTGCGCAAC AAGGGCGAGA CGCCGTACGT GATCCAGATT
TTCGTCGACG ACGGCAACGG CAATACCCGC CGCATGCCGT TTGCGGTGAC GCCGCCGCTT
TTTCGGCTGG ACGGCGGCAA GGAACAGCGC GTCAGCGTGC GTTACGTGAA GCGAGGCGCG
GGGTTGCCGC AGGACGTCGA ATCCGTTTAT TGGCTCAACG TCAAGGAGAT TCCGCCCACC
GAGAAGCGCA ACGCGGACAT CAACACGCTC AAGATCGCCG TTCTCACGCG CATCAAGCTC
TTTTACCGGC CGGCGGGCCT CGCCGGCAGC GCGGCCGACG CGCCGTCGCG GCTCAAATGG
TCCGTCGTGC CGAACCCGAT CGGGCAAGGC GTGGCGCTGA AGGTGAGCAA CCCGAGCGCG
TACCACGTGA CCTTTTCGAC GATCGAGATT CAGGCCGCGC AGAACGCGAG CGTCAACGCC
GACATGGTGA ATCCGAAAGG CGAACTGATC GTTCCCATTC CGCCGAAGGC CGTCTCGCAG
GTCGGCCCCG TCAAATTCAG CTATACCACC ATCAACGATT ACGGCGCCGT CACGCCGGCG
ACGGAAGTGA CGGCCCAACC GGTCGGTACG CCCGAGGCCG CGCCGCAGTA G
|
|---|
| Protein sequence | MRLPTVCHAA FTAVLALCGT AAHAGIQVGG TRVVFDAKVD VRDASVAVRN KGETPYVIQI
FVDDGNGNTR RMPFAVTPPL FRLDGGKEQR VSVRYVKRGA GLPQDVESVY WLNVKEIPPT
EKRNADINTL KIAVLTRIKL FYRPAGLAGS AADAPSRLKW SVVPNPIGQG VALKVSNPSA
YHVTFSTIEI QAAQNASVNA DMVNPKGELI VPIPPKAVSQ VGPVKFSYTT INDYGAVTPA
TEVTAQPVGT PEAAPQ
|
|---|
| |