Gene BMA1012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMA1012 
Symbol 
ID3089424 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei ATCC 23344 
KingdomBacteria 
Replicon accessionNC_006348 
Strand
Start bp1063499 
End bp1064782 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content67% 
IMG OID637561765 
Productpolyhydroxyalkanoate depolymerase domain-containing protein 
Protein accessionYP_102724 
Protein GI53725002 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3509] Poly(3-hydroxybutyrate) depolymerase 
TIGRFAM ID[TIGR01840] esterase, PHB depolymerase family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAACGGG TTTCGCCGAC CGCCCCCTCT TCCGCGCCCC GAAGTGGTCT ATGCTTCAGC 
AGGTCAATGC ATGACGAAGC CGCACGCGCC CGGGCGGCTG CGAACGTCCT CCGAAGCGCC
GCCGAGCCAC GTTGCGGCGT CCAACGCGCC GACACGGCGG CGAAGTGCAA TCGAACCCCT
TGTCTGCCTT CCGATATGCG CAGAAAAAAG TCCAGCATCT GGCTACCGTA CTTCGACCTG
CTCTCCCTGA CGCTGCGCGC GCGCCCTCGG CAAAAGGTCG CCAAACCCAA GCCGTCCGTC
ACGCGCCCCA CAAGCGCCGC GAAGACTCGG AGCACGAAAC GCACGCGCGC CGCGCATGCC
GGGCGAACGT CGGCGGACAA CGCGCGCGGC ACCTGGCTGC GCTCGTTTCA CTCCGCCCGC
CCCGCGGCGG GACGCTTGAT CAATCATCTC GCGTATGCGC TGTATCTGCC CGCCGTACCG
GCCGCGGCGG CAAGCATGCC CGCCGTCGTC ATGTTGCACG GATGCAAACA GACCGCGGAG
TCGTTCGCCA CCGGCACGCG CATTTGCGAT CTCGCGCAGC GGGCGGGGTT TGCCGTGTTG
CTTCCCGAGC AGGCCAAGAC TTCGCATTCT CACCGGTGCT GGAACTGGCA CGGCGATTCA
TCGCAGTCCG AAGCGCCGGC CGTCGCCTCG CTCGTCGACG CGATCGTTCG GCAGTACGGT
TTCGACCGCG AGCGAATCTA TCTGGCGGGC CTCTCCGCGG GAGCCGGCCT GGCGGCGGGA
CTCGCGATGC GCTATCCCGA GCTCTTCGCG GCCGTCGGCC TGCACTCCGG CCCGGTCTTC
GGCGCGCCCT CGTCCACCCT CGCGGCGATG AGCCTGATGC GCGGCGGCAG CCGGGAAGAT
CCGCTACGCG TCATCGAAAA CTGCGTCGAC GTTTCGGATC ATCCCGGCAT GCCCGCACTC
ATCGTCCACG GTGAACACGA TACGGTGGTG GCGAAGCAGA ACGCGATGCA ACTGGGTCTC
GAGTTCGCGC GAATCAATCG GCTCATCGAC GGGCAGGGCA CACTGCGCGT GGGCGAGCAA
CACGTCTACA GCCGCAAGGG CGTCGACTAT ACCGACTATC TCAAGTCCGG GCGGCTCGTC
GTCAGGGTGT GCATCGTTCA CGGGCTGCGG CACGCATGGA GTGGCGGCGA TCCGCGCGAA
GCATTCCATT CCGCCACCGG GCCGGATGCC ACCGCGATGT TCTGGCATTT CTTTCGGCCG
CGGCGTCGCA AGCGGGCACA GTGA
 
Protein sequence
MKRVSPTAPS SAPRSGLCFS RSMHDEAARA RAAANVLRSA AEPRCGVQRA DTAAKCNRTP 
CLPSDMRRKK SSIWLPYFDL LSLTLRARPR QKVAKPKPSV TRPTSAAKTR STKRTRAAHA
GRTSADNARG TWLRSFHSAR PAAGRLINHL AYALYLPAVP AAAASMPAVV MLHGCKQTAE
SFATGTRICD LAQRAGFAVL LPEQAKTSHS HRCWNWHGDS SQSEAPAVAS LVDAIVRQYG
FDRERIYLAG LSAGAGLAAG LAMRYPELFA AVGLHSGPVF GAPSSTLAAM SLMRGGSRED
PLRVIENCVD VSDHPGMPAL IVHGEHDTVV AKQNAMQLGL EFARINRLID GQGTLRVGEQ
HVYSRKGVDY TDYLKSGRLV VRVCIVHGLR HAWSGGDPRE AFHSATGPDA TAMFWHFFRP
RRRKRAQ