Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMA1012 |
Symbol | |
ID | 3089424 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei ATCC 23344 |
Kingdom | Bacteria |
Replicon accession | NC_006348 |
Strand | - |
Start bp | 1063499 |
End bp | 1064782 |
Gene Length | 1284 bp |
Protein Length | 427 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637561765 |
Product | polyhydroxyalkanoate depolymerase domain-containing protein |
Protein accession | YP_102724 |
Protein GI | 53725002 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3509] Poly(3-hydroxybutyrate) depolymerase |
TIGRFAM ID | [TIGR01840] esterase, PHB depolymerase family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAAACGGG TTTCGCCGAC CGCCCCCTCT TCCGCGCCCC GAAGTGGTCT ATGCTTCAGC AGGTCAATGC ATGACGAAGC CGCACGCGCC CGGGCGGCTG CGAACGTCCT CCGAAGCGCC GCCGAGCCAC GTTGCGGCGT CCAACGCGCC GACACGGCGG CGAAGTGCAA TCGAACCCCT TGTCTGCCTT CCGATATGCG CAGAAAAAAG TCCAGCATCT GGCTACCGTA CTTCGACCTG CTCTCCCTGA CGCTGCGCGC GCGCCCTCGG CAAAAGGTCG CCAAACCCAA GCCGTCCGTC ACGCGCCCCA CAAGCGCCGC GAAGACTCGG AGCACGAAAC GCACGCGCGC CGCGCATGCC GGGCGAACGT CGGCGGACAA CGCGCGCGGC ACCTGGCTGC GCTCGTTTCA CTCCGCCCGC CCCGCGGCGG GACGCTTGAT CAATCATCTC GCGTATGCGC TGTATCTGCC CGCCGTACCG GCCGCGGCGG CAAGCATGCC CGCCGTCGTC ATGTTGCACG GATGCAAACA GACCGCGGAG TCGTTCGCCA CCGGCACGCG CATTTGCGAT CTCGCGCAGC GGGCGGGGTT TGCCGTGTTG CTTCCCGAGC AGGCCAAGAC TTCGCATTCT CACCGGTGCT GGAACTGGCA CGGCGATTCA TCGCAGTCCG AAGCGCCGGC CGTCGCCTCG CTCGTCGACG CGATCGTTCG GCAGTACGGT TTCGACCGCG AGCGAATCTA TCTGGCGGGC CTCTCCGCGG GAGCCGGCCT GGCGGCGGGA CTCGCGATGC GCTATCCCGA GCTCTTCGCG GCCGTCGGCC TGCACTCCGG CCCGGTCTTC GGCGCGCCCT CGTCCACCCT CGCGGCGATG AGCCTGATGC GCGGCGGCAG CCGGGAAGAT CCGCTACGCG TCATCGAAAA CTGCGTCGAC GTTTCGGATC ATCCCGGCAT GCCCGCACTC ATCGTCCACG GTGAACACGA TACGGTGGTG GCGAAGCAGA ACGCGATGCA ACTGGGTCTC GAGTTCGCGC GAATCAATCG GCTCATCGAC GGGCAGGGCA CACTGCGCGT GGGCGAGCAA CACGTCTACA GCCGCAAGGG CGTCGACTAT ACCGACTATC TCAAGTCCGG GCGGCTCGTC GTCAGGGTGT GCATCGTTCA CGGGCTGCGG CACGCATGGA GTGGCGGCGA TCCGCGCGAA GCATTCCATT CCGCCACCGG GCCGGATGCC ACCGCGATGT TCTGGCATTT CTTTCGGCCG CGGCGTCGCA AGCGGGCACA GTGA
|
Protein sequence | MKRVSPTAPS SAPRSGLCFS RSMHDEAARA RAAANVLRSA AEPRCGVQRA DTAAKCNRTP CLPSDMRRKK SSIWLPYFDL LSLTLRARPR QKVAKPKPSV TRPTSAAKTR STKRTRAAHA GRTSADNARG TWLRSFHSAR PAAGRLINHL AYALYLPAVP AAAASMPAVV MLHGCKQTAE SFATGTRICD LAQRAGFAVL LPEQAKTSHS HRCWNWHGDS SQSEAPAVAS LVDAIVRQYG FDRERIYLAG LSAGAGLAAG LAMRYPELFA AVGLHSGPVF GAPSSTLAAM SLMRGGSRED PLRVIENCVD VSDHPGMPAL IVHGEHDTVV AKQNAMQLGL EFARINRLID GQGTLRVGEQ HVYSRKGVDY TDYLKSGRLV VRVCIVHGLR HAWSGGDPRE AFHSATGPDA TAMFWHFFRP RRRKRAQ
|
| |