Gene BMA0743 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMA0743 
Symbol 
ID3089030 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei ATCC 23344 
KingdomBacteria 
Replicon accessionNC_006348 
Strand- 
Start bp774237 
End bp775325 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content65% 
IMG OID637561551 
Productouter membrane porin, putative 
Protein accessionYP_102511 
Protein GI53725160 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3203] Outer membrane protein (porin) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.000425296 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAAG TTATGCTCGC GGCGGTACTG GCGACTGCCG GAGTGGCGGC TCACGCTCAA 
AGCAGCGTGA CGCTGTACGG CCGTCTGGAC GCCGGCATCG AATACATGAA CGGCCTGCCG 
AGCGCGAACG GCGGCAGCAC GAGCCGCTGG CGCGCGGAAA GCGGCAACTG GGGCACGAGC 
CTCTGGGGCT TGAAGGGCTC CGAGGACATC GGCGGCGGCA ACAAGATCGT GTTCCAGTTG 
GAAGGCAGCT TCGACACGAT GAACGGCAAC GGCCCGGGCG CCGGCAGCAT CTGGAACCGC 
TGGGCAACGA TCGGCATCTC CAACGACACG TACGGTACCC TGCTGCTCGG CCGCGAGCTC 
GCGATCGCGA ACGGCGTGTG GGACTTCGAT CCGTTCGGCC AGTCGTCGTG GTCGACGGCT 
TCGCTCGTGC GCGGGCGCAA CTGGAACAAG ACCAGCAACA ACATTTCGTA TCAATCGCCG 
AAGTTCTACG GCTTCGACGT CTACGGCCAA TACGCGCTGT CGAACGCGAC GAACTGGAAC 
GGCAACGGCT CGACGAGCCA GGGCCGCAGC GCGGGCCTGC AGCTCACCTA CACGACCTCG 
CTGTTCCAGA TCCGCGGCCT CTATGACGAA GCGCGCGATC CGGCGAACGG CAAGCTCGAC 
GACGTGTTCA ACTACTCGCG CGAATATTTC GCTGGCGTGA ACGTGTTCCT CGGCCAGTTC 
AAGCTGCAGG CGGCATACCA GGCGTCGCAC GCGGACGGCG GCCCGGTCGT GAACAACGGC 
ATCACGACGA CCCAGCAGGT CTGGGGCGGC GTGACGTGGC AGGCAACGCC CGCCGCCGCG 
CTGATCGCGG CCGTCTATCA CGTGAACGCG AATCACGGCG GCGGCAACGC GAACATCTTC 
ACGGTCGGCG GCTCGTACAA CCTGTCGAAG CGCACGCTGC TCGACGTGCA GGTCGCGACG 
GTGCGCAACA GCAAGACCGC GAACTTTGGC CTGAACGCGA ACCCGGCCGG CACCGACATC 
TCGACCGGCA ATCCGAAGTT CGGCGGCAGC CAGACGGGCG TGTACGCCGG CATCCAGCAC 
CTGTTCTGA
 
Protein sequence
MKKVMLAAVL ATAGVAAHAQ SSVTLYGRLD AGIEYMNGLP SANGGSTSRW RAESGNWGTS 
LWGLKGSEDI GGGNKIVFQL EGSFDTMNGN GPGAGSIWNR WATIGISNDT YGTLLLGREL 
AIANGVWDFD PFGQSSWSTA SLVRGRNWNK TSNNISYQSP KFYGFDVYGQ YALSNATNWN 
GNGSTSQGRS AGLQLTYTTS LFQIRGLYDE ARDPANGKLD DVFNYSREYF AGVNVFLGQF 
KLQAAYQASH ADGGPVVNNG ITTTQQVWGG VTWQATPAAA LIAAVYHVNA NHGGGNANIF 
TVGGSYNLSK RTLLDVQVAT VRNSKTANFG LNANPAGTDI STGNPKFGGS QTGVYAGIQH 
LF