Gene BMA0552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMA0552 
SymboluvrC 
ID3088063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei ATCC 23344 
KingdomBacteria 
Replicon accessionNC_006348 
Strand
Start bp578317 
End bp580566 
Gene Length2250 bp 
Protein Length749 aa 
Translation table11 
GC content70% 
IMG OID637561384 
Productexcinuclease ABC subunit C 
Protein accessionYP_102348 
Protein GI53726362 
COG category[L] Replication, recombination and repair 
COG ID[COG0322] Nuclease subunit of the excinuclease complex 
TIGRFAM ID[TIGR00194] excinuclease ABC, C subunit 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.344791 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGCATGA CATCCCCCGA CGCACCCGAA TCCCGTTTCG AACCCAAGCC GATCCTCGCC 
CAACTGCCGC ATCTGCCTGG CGTCTACCGT TACTACGACG TGCAGGACGC GGTACTGTAC
GTCGGCAAGG CGCGCGACCT GAAAAAGCGC GTGTCGAGCT ACTTCACGAA AACGCAGCTG
TCGCCGCGCA TCGCGATGAT GATCACGCGC ATCGCGCGCA TCGAGACCAC GGTCACGCGC
TCGGAGGCCG AGGCGCTGCT GCTCGAGAAC AACCTGATCA AGGCGCTCGC GCCGCGCTAC
AACATCCTGT TTCGCGACGA CAAGTCGTAT CCGTACCTGA AGCTCACGGG CCATCGGTTT
CCGCGAATGG CGTATTACCG CGGCGCGGTC GACAAGAAGA ACCAGTACTT CGGGCCGTTT
CCGAGCGCGT GGGCGGTGCG CGAGAGCATC CAGATCCTGC AGCGCGTGTT CCAGTTGCGC
ACCTGCGAGG ACTCGGTGTT CAACAACCGC ACGCGCCCGT GCCTGCTGCA CCAGATCGGC
CGCTGCTCGG CGCCGTGCGT CGGCGCGATC GGCGAGGAGG ACTACGCGCG CGACGTCGAC
AACGCGTCGC GCTTCCTGCT CGGCCGGCAG GGCGAGGTGA TGGGCGAGCT CGAGCGAAAG
ATGCACGCGT TCGCGGCCGA GCTGAAGTTC GAGCAGGCCG CGGCCGTGCG CAACCAGATG
AGCTCGCTCG CGAAGGTGCT GCATCAGCAG GCGATCGACG TTGGCGGCGA CAGCGACGTC
GACATCCTCG CGGTCGTCGC GCAGGGCGGC CGTGTGTGCG TGAACCTCGC GATGGTGCGC
GGCGGCCGGC ATCTCGGCGA CAAGGCGTAT TTCCCGGCGC ACGTCGAAAC CGCGCTCGCG
CTCGCGGGCG ATATCGAAGC GCTGGCCGGC GAAGGCGCCG GCGACGGCGT GCAGGCCGCG
GCGCAGCCCG CGCAAGCGCC GCTCGCGACG GACGCGGATG CGACGGATGC GGCGGCGACT
GAGGCGAAGA CCGTGACGGC GGCCGCGGCG GCGCGTGCGG GCGCTCGCAC GGCGCAGGCC
GCCGGAGCGC GCGCCGCCGC GAGCGCCGAA GGCGATGTCG AGCGACGTGC GGAGGGAGAA
ACGCACGCGC GCGCCGACGC GCGCGAAGCC GCCGCACTGC CCGACGGCGC CGCCGCTGCT
CAGGAAGCGG ACGCGGACGT CGACGCCGCG CCGCTCGAAA CCGAGGTGCT CGAAGCGTTC
ATCGCACAGC ACTATCTCGG CAATCGCGTG CCGCCGGTTC TCGTCGTGAG CCATGCGCCC
GCGAATCGCG AGCTGATCGA TCTGCTCGTC GAACAGGCGG GGCACAAGGT CGCGGTCGTG
CGGCAGCCGC AGGGCCAGAA GCGCGCGTGG CTCACGATGG CCGAGCAGAA CGCGCGCCTC
GCGCTCGCGC GGCTGTTGTC CGAGCAGGGC TCGCAGCAGG CGCGCACGCG CTCGCTCGCC
GACGTGCTCG GCTACGAGAG CGACGATCTC GCGCAGCTGC GCATCGAGTG CTTCGACATC
AGCCACACGA TGGGCGAGGC GACGCAAGCG TCGTGCGTCG TCTATCACCA TCACAGGATG
CAGTCGTCCG AGTACCGCCG CTACAACATC GCGGGAATCA CGCCCGGCGA CGACTACGCG
GCGATGCGCC AGGTGCTCAC GCGCCGCTAC GAGAAGATGG TCGAGGAGGC GGCTGCCGAG
GCGTCGGCCG ACGAGGCGGC CGGCATCGAC GGCAATGCGG TGCATGCGGC CGCTTCGGCG
GGGCGGCTGC CGAACGTCGT GCTGATCGAC GGCGGCCGGG GCCAGGTCGA GATCGCGCGC
CAGGTGTTTT CCGAGCTCGG GCTCGATATC TCGATGCTCG TCGGCGTCGC GAAGGGCGAG
GGACGCAAGG TCGGGCTCGA GACGCTGATC TTCGCCGACG GCCGCGCGCC GCTCGAGCTC
GGCAAGGAGA GCGCGGCGCT GATGCTCGTC GCGCAGATCC GCGACGAGGC GCACCGTTTC
GCGATCACCG GGATGCGCGC GAAGCGGGCG AAGACGCGGC AGACGTCGCG GCTCGAGGAA
CTGGAGGGCG TCGGTGCGAA GCGCCGGCAG CGGCTGCTCG CGCGCTTCGG CGGCCTGCGC
GGCGTCGTCG CCGCGAGCGT CGACGAGCTC GCGAGCGTCG AAGGCATTTC CCGCGCGCTC
GCCGAGCAGA TCTACCGGCA ACTCCACTGA
 
Protein sequence
MSMTSPDAPE SRFEPKPILA QLPHLPGVYR YYDVQDAVLY VGKARDLKKR VSSYFTKTQL 
SPRIAMMITR IARIETTVTR SEAEALLLEN NLIKALAPRY NILFRDDKSY PYLKLTGHRF
PRMAYYRGAV DKKNQYFGPF PSAWAVRESI QILQRVFQLR TCEDSVFNNR TRPCLLHQIG
RCSAPCVGAI GEEDYARDVD NASRFLLGRQ GEVMGELERK MHAFAAELKF EQAAAVRNQM
SSLAKVLHQQ AIDVGGDSDV DILAVVAQGG RVCVNLAMVR GGRHLGDKAY FPAHVETALA
LAGDIEALAG EGAGDGVQAA AQPAQAPLAT DADATDAAAT EAKTVTAAAA ARAGARTAQA
AGARAAASAE GDVERRAEGE THARADAREA AALPDGAAAA QEADADVDAA PLETEVLEAF
IAQHYLGNRV PPVLVVSHAP ANRELIDLLV EQAGHKVAVV RQPQGQKRAW LTMAEQNARL
ALARLLSEQG SQQARTRSLA DVLGYESDDL AQLRIECFDI SHTMGEATQA SCVVYHHHRM
QSSEYRRYNI AGITPGDDYA AMRQVLTRRY EKMVEEAAAE ASADEAAGID GNAVHAAASA
GRLPNVVLID GGRGQVEIAR QVFSELGLDI SMLVGVAKGE GRKVGLETLI FADGRAPLEL
GKESAALMLV AQIRDEAHRF AITGMRAKRA KTRQTSRLEE LEGVGAKRRQ RLLARFGGLR
GVVAASVDEL ASVEGISRAL AEQIYRQLH