Gene BMA0521 details

Gene Information

• Locus tag: BMA0521
• Symbol: rluC
• ID: 3091014
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia mallei ATCC 23344
• Kingdom: Bacteria
• Replicon accession: NC_006348
• Strand: +
• Start bp: 549981
• End bp: 550988
• Gene Length: 1008 bp
• Protein Length: 335 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 637561354
• Product: ribosomal large subunit pseudouridine synthase C
• Protein accession: YP_102318
• Protein GI: 53725726
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0564] Pseudouridylate synthases, 23S RNA-specific
• TIGRFAM ID: [TIGR00005] pseudouridine synthase, RluA family

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.107606
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATGAGT TAGGCAAAAA ATCCCATAAT TCGGTCGCAA GCGGTCAGGT TTCGCTCATC 
GAGATCGACG AAAGCGCGGC CGGGCAGCGC ATCGACAACT TCCTGCTGCG CGTCTGCAAG 
GGCGTGCCGA AGAGTCATAT TTACCGGATC CTGCGCAGCG GCGAAGTCCG CGTGAACAAG 
GGCAGAATCG ATGCGCAGTA CCGGCTCGCG TTCGGCGACG TCGTGCGCGT GCCGCCCGTG 
CGCGTCGCGG CGGCGGACCT CGCGCGCGCG GCCGGCCCGG CGCCCGTGCC CGCCGCGGAA 
TTCGAGATCC TGTTCGAGGA CGACGCGATC ATCGTGCTGA ACAAGCCGGC GGGCGTCGCC 
GTGCACGGCG GCAGCGGCGT CGCGTTCGGC GTGATCGAGC AGATGCGCCA TGCGCGGCCG 
CACGCGAAAT TCCTCGAACT CGCGCACCGG CTCGACCGCG AGACCTCGGG CATCCTGATG 
CTCGCGAAGA AGCGCTCGGC GCTCGTCGGG CTGCACGAGC AGATTCGCGA GAACCGGATG 
GACAAGCGCT ACTTCGCCTG CGTGCATGGC GACTGGGCGG CCGACTGGGG CCGCCGCCGC 
GTGGTGAAGG CGCCCCTTTT CAAGTACGCG ACGCCCGACG GCGAGCGGCG CGTGCGGGTT 
CAGGAGGACG GCCTGCCGTC GCACACGGTG TTCAATCTCG TCGACCGCTG GCCGGACTAC 
GCGCTCGTCG AAGCGGAACT CAAGACGGGG CGGACCCATC AGATCCGCGT GCACCTCGCG 
CATCTCGGCC TGCCGATCGT CGGCGACGCC AAGTACGGCG ATTTCGCGCT GAACAAGGCG 
CTTGCGCGCG CGAACGCGGT GCCGTCGATC AAGCGGATGT TCCTGCACGC GCATCGGCTG 
CGCCTCGCGC ATCCGCTGAC GGGCGAGCCG CTGCAGTTCG ACGCGCCGCT GCCCGCCGAG 
TGCCGGCAAT TCATCGATCA ACTCTCCGAC TTGCGCGACA CCGCGTGA 

 

Protein sequence

MNELGKKSHN SVASGQVSLI EIDESAAGQR IDNFLLRVCK GVPKSHIYRI LRSGEVRVNK 
GRIDAQYRLA FGDVVRVPPV RVAAADLARA AGPAPVPAAE FEILFEDDAI IVLNKPAGVA 
VHGGSGVAFG VIEQMRHARP HAKFLELAHR LDRETSGILM LAKKRSALVG LHEQIRENRM 
DKRYFACVHG DWAADWGRRR VVKAPLFKYA TPDGERRVRV QEDGLPSHTV FNLVDRWPDY 
ALVEAELKTG RTHQIRVHLA HLGLPIVGDA KYGDFALNKA LARANAVPSI KRMFLHAHRL 
RLAHPLTGEP LQFDAPLPAE CRQFIDQLSD LRDTA