Gene BMA0417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMA0417 
Symbol 
ID3088771 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei ATCC 23344 
KingdomBacteria 
Replicon accessionNC_006348 
Strand
Start bp440773 
End bp442197 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content67% 
IMG OID637561262 
Productmurein transglycosylase domain-containing protein 
Protein accessionYP_102230 
Protein GI53724776 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2951] Membrane-bound lytic murein transglycosylase B 
TIGRFAM ID[TIGR02282] lytic murein transglycosylase B 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGCGA TATCGTCTGG TGCGAAGTTC GCCGCTAACT TACCACATCA CGCCCCCCGC 
CGGGCCGGCG CGACGGGCGT GTCGGTTATA CTGCCCCGAA ATCGTCCGTC TCGTCCGCTT
CGCTTCGACA TGATCTTCCA CCAGCCTGCC GCACCCGCCT CGCTCGCTTT CCGTCTTCGC
TTCCCGCTCG CCGCGCTGTC GCTCGCCGCG ACGCTCTTCG CGTCGGCCGC CGTCGCGCAA
ACGCAGCCCG CCGCAGCCGT CGTCGCGCAA GAGCCGGCGC AATCGCAATC GCAATCGCAA
TCGCAATTGC AATTGCAGCC GCAGCCGCAG CCGCAGCCGC AGCCGAGCGT ACAGCAGGGG
CAAACATTCG AAGAAGAAAT CATTCCGCAG CGCTACGCGA ACAACGCGAA GATCGACGCG
TTCATCGCCG ACATGGTCGC GCGCCACGAC TTCGATGCGA ACGCGCTGCA TGCGCTGTTC
GCGCGCGTGA GCTACTCGGC GACCGCCGCG AAGCTCGTGA TGCCCGCGCC GTCGCCAGCC
GTCAAGAACT GGCGCGTCTA CCAGTCGCGC TTTCTCGACG CGGTGCGCGT GAACGCCGGC
GTGAAATTCT GGCGCGCGAA CCAAGGCACG CTGCAACGCG CGTCCACGGA ATTCGGCGTG
CCGCCCGAGG TGATCGTCGG CATCATCGGC GTCGAGACGA TCTACGGCCG CTACATGGGC
AACTTCCGCA CGCTCGACGC GCTGACGACG CTCGCGTTCG ACTATCCGAA CACGCCGAAT
CGCGACGCGC GGCAGGCGAC GTTCCGCAAG AATCTCGAAG ATTTCCTCGT CTGGACGCGC
GACAGCCAGC TCGACCCGAC GGGCGTGCTC GGCTCGTACA CGGGCGCGGT CGGCATCCCG
CAGTTCCTGC CGAGCAGCAT CCGCGATTAC GCGGTCGACT ACGACGGCAA TGGTCACATC
GATCTGCGCG CGAGCCAGGC CGATGCGATC GGCAGCGTCG CGAACTATCT GAAGCAGCAC
GGCTGGGAAA CCGGTCGGCC GGTAGTATGG AACATCGCGC CCGATACGGG CAGCCAGGGC
GTCGCGCAAG CGGCGGCGGA CGGTCGCCCC GAGCCGCACT GGGTGCTGTC GCAGTTGCTG
CGCGCGGGGC TCGTGCTCGA CGAGCCGTCC GTGAACATCG CATCGGAGGC GAGCACGCCC
GTCACCGTGG TCGATTTGCC GACGCCCGGC CGCGCAACCG AATACAAGCT CGGACTGCAG
AATTTCTACG TGCTGACCCG CTACAACCGC AGCTTCTTCT ATGCGCTCGC CGTCTATCAG
CTGGGTGAGC GTGTGAAGGC GCAGATGGAA GCGAGCGGCG CGTTGACACC GTCGCCCGCC
GACGCGGCAA CCGGCTCACC CGCCGCACAG CCGCCGTCCG AATGA
 
Protein sequence
MSAISSGAKF AANLPHHAPR RAGATGVSVI LPRNRPSRPL RFDMIFHQPA APASLAFRLR 
FPLAALSLAA TLFASAAVAQ TQPAAAVVAQ EPAQSQSQSQ SQLQLQPQPQ PQPQPSVQQG
QTFEEEIIPQ RYANNAKIDA FIADMVARHD FDANALHALF ARVSYSATAA KLVMPAPSPA
VKNWRVYQSR FLDAVRVNAG VKFWRANQGT LQRASTEFGV PPEVIVGIIG VETIYGRYMG
NFRTLDALTT LAFDYPNTPN RDARQATFRK NLEDFLVWTR DSQLDPTGVL GSYTGAVGIP
QFLPSSIRDY AVDYDGNGHI DLRASQADAI GSVANYLKQH GWETGRPVVW NIAPDTGSQG
VAQAAADGRP EPHWVLSQLL RAGLVLDEPS VNIASEASTP VTVVDLPTPG RATEYKLGLQ
NFYVLTRYNR SFFYALAVYQ LGERVKAQME ASGALTPSPA DAATGSPAAQ PPSE