Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMA0316 |
Symbol | |
ID | 3088559 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei ATCC 23344 |
Kingdom | Bacteria |
Replicon accession | NC_006348 |
Strand | + |
Start bp | 332151 |
End bp | 335351 |
Gene Length | 3201 bp |
Protein Length | 1066 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637561170 |
Product | hydrophobe/amphiphile efflux family protein |
Protein accession | YP_102138 |
Protein GI | 53725077 |
COG category | [V] Defense mechanisms |
COG ID | [COG0841] Cation/multidrug efflux pump |
TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.611401 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAAGT TTTTTATCGA TCGCCCGATC TTCGCGTGGG TGATCGCCAT CATCCTGATG CTGGCCGGCG TCGCGGCGAT CTTCACGCTG CCGATCGCCC AGTATCCGAC GATCGCGCCG CCGTCGATCC AGATCACCGC GAACTACCCG GGCGCTTCGG CGAAGACCGT CGAAGACACC GTCACGCAGG TGATCGAGCA GCAGATGAGC GGCCTCGACA ACTTCCTGTA CATGTCGTCG ACGAGTGACG ACTCGGGCAA CGCGACGATC ACGATCACAT TCGCGCCGGG CACGAACCCG GACATCGCGC AGGTTCAGGT GCAGAACAAG CTGTCGCTCG CGACGCCGAT CCTGCCGCAG GTGGTGCAGC AGCTCGGCCT GTCGGTGACG AAGTCGAGCA GCAGCTTCCT GCTCGTGCTC GCCTTCAACT CCGAAGACGG CAGCATGAAC AAGTACGACC TGGCGAACTA CGTCGCGTCG CACGTGAAGG ACCCGATCAG CCGGATCAAC GGCGTCGGCA CTGTCACGCT GTTCGGCTCG CAGTACGCGA TGCGGATCTG GCTCGACCCG ACCAAGCTCA CGAACTACGG GCTCACGCCG GTCGACGTGA CGAGCGCGAT CTCCGCGCAG AACGTGCAGA TCGCGGGCGG CCAGCTGGGC GGCACGCCGG CCGTGCCGGG CACCGTGCTG CAGGCGACGA TCACCGAGGC GACGCTGCTG CAGACGCCCG AGCAGTTCGG CAACATCCTG CTGAAGGTGA ATCAGGACGG CTCGCAGGTG CGGCTGAAGG ACGTCGCGCA GATCGGCCTC GGCGGCGAGA CGTACAACTT CGACACGAAG TACAACGGCC AGCCGACCGC CGCGCTCGGC ATCCAGCTCG CGACCAACGC GAACGCGCTC GCGACCGCGA AGGCGGTGCG CGCGAAGATC GACGAGATGT CGGCGTACTT CCCGCACGGC CTCGTCGTCA AGTACCCGTA CGACACGACG CCGTTCGTGC GCCTGTCGAT CGAGGAAGTG GTGAAGACGC TGCTCGAGGG TATCGTCCTC GTGTTCCTCG TGATGTATCT GTTCCTGCAG AACCTGCGGG CGACGATCAT CCCGACGATC GCGGTGCCCG TGGTGCTGCT CGGCACGTTC GCGATCATGT CGATGGTGGG CTTCTCGATC AACGTGCTGT CGATGTTCGG CCTCGTGCTC GCGATCGGCC TGCTCGTCGA CGATGCGATC GTCGTCGTCG AGAACGTCGA GCGGGTGATG GCGGAAGAGG GCTTGCCGCC GAAGGAGGCG ACGCGCAAGG CGATGGGCCA GATCACGGGC GCGCTCGTGG GCGTGGCGCT CGTGCTGTCG GCGGTGTTCG TGCCGGTGGC GTTCTCGGGC GGCTCGGTCG GCGCGATCTA TCGGCAGTTC TCGCTGACGA TCGTCTCGGC GATGGTGCTT TCCGTGCTCG TCGCGTTGAT TCTGACGCCG GCGCTGTGCG CGACGATCCT CAAGCCGATC CCGCAAGGGC ATCACGAGGA GAAGAAGGGC TTCTTCGGCT GGTTCAACCG CACCTTCAAC TCGAGCCGCG ACAAGTATCA CGTCGGCGTC CACCACGTGA TCAAGCGCTC GGGCCGCTGG CTCATCATCT ATCTCGCGGT GATCGTCGCC GTCGGCCTGC TGTTCGTGCG CCTGCCGAAA TCGTTCCTGC CCGACGAGGA CCAGGGCCTG ATGTTCGTGA TCGTCCAGAC GCCGTCGGGC TCGACGCAGG AGACGACCGC GCGCACGCTC GCGAACATTT CCGACTACCT GCTCACGCAG GAGAAGGACA TCGTCGAATC CGCGTTCACG GTCAACGGCT TCAGCTTCGC GGGCCGCGGC CAGAACTCGG GCCTCGTGTT CGTCAAGCTG AAGGACTACT CGCAGCGGCA GAGCTCGGAC CAGAAGGTGC AGGCGCTGAT CGGCCGGATG TTCGGACGCT ACGCGGGCTA CAAGGACGCG CTCGTGATTC CGTTCAACCC GCCGTCGATT CCCGAACTCG GCACGGCGGC CGGCTTCGAC TTCGAGCTGA CCGACAACGC GGGCCTCGGC CACGATGCGC TGATGGCCGC GCGCAACCAG TTGCTCGGGA TGGCCGCGAA GGATCCGACG CTGCGGGGCG TGCGTCCGAA CGGGCTGAAC GACACGCCGC AGTACAAGGT CGACATCGAT CGCGAGAAGG CGAACGCGCT CGGCGTGACC GCGGATGCGA TCGACCAGAC GTTCTCGATC GCGTGGGCGT CGAAGTACGT GAACAACTTC CTCGACACCG ACGGCCGGAT CAAGAAGGTG TACGTGCAGT CCGACGCGCC GTTCCGGATG ACGCCGGAGG ACATGAACAT CTGGTACGTG CGCAACGGCT CGGGCGGGAT GGTGCCGTTC TCCGCGTTCG CGACGGGCCA CTGGACCTAC GGCTCGCCGA AGCTCGAGCG CTACAACGGC ATCTCGGCGA TGGAAATCCA GGGCCAGGCC GCGCCGGGCA AGTCGACCGG CCAGGCGATG ACGGCGATGG AGACGCTCGC GAAGAAGCTG CCGACGGGCA TCGGCTATTC GTGGACGGGG CTGTCGTTCC AGGAAATCCA GTCGGGCTCG CAGGCGCCGA TCCTGTACGC GATCTCGATC CTCGTCGTGT TCCTGTGTCT CGCCGCGCTG TATGAAAGCT GGTCGATCCC GTTCTCGGTG ATCATGGTCG TGCCGCTCGG CGTGATCGGC GCGCTGCTCG CCGCAACGCT GCGCGGGCTC GAGAACGACG TGTTCTTCCA GGTCGGCCTG CTGACGACGG TGGGGCTGTC GGCGAAGAAC GCGATCCTGA TCGTCGAGTT CGCGCGCGAG CTGCAGCAAA CGGAGAAGAT GGGGCCGATC GAGGCGGCGC TCGAGGCGGC GCGGCTGCGG CTGCGTCCGA TTCTGATGAC GTCGCTCGCG TTCATTCTCG GCGTGATGCT GCTCGCGATC AGCAACGGCG CAGGCTCGGC GAGCCAGCAC GCGATCGGCA CCGGCGTGAT CGGCGGGATG ATCACCGCGA CGTTCCTCGC GATCTTCATG ATCCCGATGT TCTTCGTGAA GGTGCGGGCA GTGTTCAGCG GCGAGAAGGA AGACGCCGAC GAAGCGCTGC GCCTCGCGCA CGAGCACATG CACCGTGACG ACAAGCCGGA GCACGGCGAC GACGCTGGCA AGAAGGACTA A
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Protein sequence | MAKFFIDRPI FAWVIAIILM LAGVAAIFTL PIAQYPTIAP PSIQITANYP GASAKTVEDT VTQVIEQQMS GLDNFLYMSS TSDDSGNATI TITFAPGTNP DIAQVQVQNK LSLATPILPQ VVQQLGLSVT KSSSSFLLVL AFNSEDGSMN KYDLANYVAS HVKDPISRIN GVGTVTLFGS QYAMRIWLDP TKLTNYGLTP VDVTSAISAQ NVQIAGGQLG GTPAVPGTVL QATITEATLL QTPEQFGNIL LKVNQDGSQV RLKDVAQIGL GGETYNFDTK YNGQPTAALG IQLATNANAL ATAKAVRAKI DEMSAYFPHG LVVKYPYDTT PFVRLSIEEV VKTLLEGIVL VFLVMYLFLQ NLRATIIPTI AVPVVLLGTF AIMSMVGFSI NVLSMFGLVL AIGLLVDDAI VVVENVERVM AEEGLPPKEA TRKAMGQITG ALVGVALVLS AVFVPVAFSG GSVGAIYRQF SLTIVSAMVL SVLVALILTP ALCATILKPI PQGHHEEKKG FFGWFNRTFN SSRDKYHVGV HHVIKRSGRW LIIYLAVIVA VGLLFVRLPK SFLPDEDQGL MFVIVQTPSG STQETTARTL ANISDYLLTQ EKDIVESAFT VNGFSFAGRG QNSGLVFVKL KDYSQRQSSD QKVQALIGRM FGRYAGYKDA LVIPFNPPSI PELGTAAGFD FELTDNAGLG HDALMAARNQ LLGMAAKDPT LRGVRPNGLN DTPQYKVDID REKANALGVT ADAIDQTFSI AWASKYVNNF LDTDGRIKKV YVQSDAPFRM TPEDMNIWYV RNGSGGMVPF SAFATGHWTY GSPKLERYNG ISAMEIQGQA APGKSTGQAM TAMETLAKKL PTGIGYSWTG LSFQEIQSGS QAPILYAISI LVVFLCLAAL YESWSIPFSV IMVVPLGVIG ALLAATLRGL ENDVFFQVGL LTTVGLSAKN AILIVEFARE LQQTEKMGPI EAALEAARLR LRPILMTSLA FILGVMLLAI SNGAGSASQH AIGTGVIGGM ITATFLAIFM IPMFFVKVRA VFSGEKEDAD EALRLAHEHM HRDDKPEHGD DAGKKD
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