Gene BMA0124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMA0124 
Symbol 
ID3090427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei ATCC 23344 
KingdomBacteria 
Replicon accessionNC_006348 
Strand+ 
Start bp136507 
End bp137559 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content71% 
IMG OID637560995 
Producthistone deacetylase family protein 
Protein accessionYP_101966 
Protein GI53724658 
COG category[B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTATGTCG TGCCGCACGG CACGCTGAAC CTCGGCGAGC ATTTCGACAG CCCGCTGAGG 
CTCGCGTATA CGAAGCAGTT GCTCGACGCG GTCGGCATGA CCGAGCGCCT GACGCGCGTC 
GCTTTCGCGC GTGCGACCGA TGAGCAATTG CTGCGCGTGC ATCGGCCCGA ATATCTGCGG 
CGGCTCGCCG AGGCTTGCGC GGTGGCGGGC GAGCAGGTGG TGCGGCTCGG CGACGACGCG 
GCGGGCAGCG CGTCGACCGA AGACGTCGCG CGGCTCGCGG CGGGCGCCGC GTGCGCGGCT 
GTCGATGCGG TGATGACGGG GCCGCTTCGG CAGGCGTATG CGCTGATCCG GCCGTCTGGC 
CACCATGCGG GCGCCGATTT CGCGATGGGC TACTGCTACT ACAACAACGT CGCGATCGCG 
GCGCGCCATG CGCAGGCCGC GCACGGCGTC GAGCGGGTGG CGATCGTCGA CTGGGACGTG 
CATCACGGCA ACGGCACGCA GCAGGCGTTC TACGACGATC CTTCGGTATT GTTCGTGTCG 
CTGCACGAGG CGGCGAATTT CCCGGTCGAC GGCGGCGAGG CGCGCGAGAC GGGCGGCGGC 
GCGGGCGCGG GCTACAACGC GAACGTGCCG TTGCCGTCCG GCACGGGCGA CGCCGGCTAT 
CGGCACGCGT TCGACGAGCT GGTGCTGCCG CTCGTCGAGG CGTTCGCGCC GCAGCTCATT 
CTCGTGTCGG CGGGGCAGGA TGCGAACGCG TTCGATCCGC TCGGCCGCAT GCGCGTGCAG 
CGCGACGGGT TCCGGCACAT GGCGCGCGCA TTGCGGCAAG CGGCGGGCGG CGCATGCGGG 
GGGCGCATCG TGATGCTGCA GGAGGGCGGC TACAGCCTGC CGTATCTGCC GATCGCGACG 
CTCGGCGTGC TCGAGGGGCT CGTCGGCTGG AACGCGCCGT TCGACGATCC GCACCAGTTC 
GTCCAGTATC CGCTCGGCGA AGGCGAGCGC GCCGCGGTGA AAGCCGCCCG CGCCGCGCTG 
GCGCCGTATT GGCCCACGCT GCATCGATCC TGA
 
Protein sequence
MYVVPHGTLN LGEHFDSPLR LAYTKQLLDA VGMTERLTRV AFARATDEQL LRVHRPEYLR 
RLAEACAVAG EQVVRLGDDA AGSASTEDVA RLAAGAACAA VDAVMTGPLR QAYALIRPSG 
HHAGADFAMG YCYYNNVAIA ARHAQAAHGV ERVAIVDWDV HHGNGTQQAF YDDPSVLFVS 
LHEAANFPVD GGEARETGGG AGAGYNANVP LPSGTGDAGY RHAFDELVLP LVEAFAPQLI 
LVSAGQDANA FDPLGRMRVQ RDGFRHMARA LRQAAGGACG GRIVMLQEGG YSLPYLPIAT 
LGVLEGLVGW NAPFDDPHQF VQYPLGEGER AAVKAARAAL APYWPTLHRS