Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMA0067 |
Symbol | cpdB |
ID | 3090962 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei ATCC 23344 |
Kingdom | Bacteria |
Replicon accession | NC_006348 |
Strand | + |
Start bp | 73171 |
End bp | 75231 |
Gene Length | 2061 bp |
Protein Length | 686 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637560945 |
Product | 2`,3`-cyclic-nucleotide 2`-phosphodiesterase |
Protein accession | YP_101916 |
Protein GI | 53724610 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0737] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases |
TIGRFAM ID | [TIGR01390] 2',3'-cyclic-nucleotide 2'-phosphodiesterase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.348969 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCATTCC CCTTGCGTTT TCGCCGGCGG CGCCTTGCCG CCGCCCTCGT CGCGTGCGCG GCGCTCGTCG CGGGCTGCAA CGACGACGTC GATTCGCCCG GCGCGCAGTC CGGCGCGAGC GCGCCCGCCG GCACGAAGGC GACGCTCGCC GTGCTCGAGA CGACCGATCT GCACACGAAC GTGCTGTCGT ACGACTACTT CAAGCTCGCG GCCGACAAGT CGCTCGGCTT CGAGCGGGTC GCGACGCTGA TCGCGCAGGC GCGCGCGCAA TATCCGAACA CGCTGCTGCT CGATAACGGC GACACGATCC AGGGCACGGC GCTCGCCGAC TATCAGGCGC TCGTGAAGCC CGTGTCGTGC GGCGAGACGC TTGCGATCTA CAAGGTGATG AACGCGGCGA AGTTCGACGG CGGCGGCATC GGCAATCACG AATTCAACTA CGGGCTGCCG TACCTGTCGC AGGTGACGGG CAACGCGTTC GCCGTCGACG GCCTGCCCGA TCCGGCCCGG CAGAAGAAAT GCGCGGGGCC GGACTTCCCG CAGGTGCTCG CGAACGTGAT CAGCGCGAAG ACGAACGCGC CCCTCTTCAC GCCGTACACG ATCCTCACGA AGAACGTCAC CGCGACGACG CCCGACGGCC GCACGGTCAC GGCGCCCGTG AAGGTCGGCA TCATCGGCTT CACGCCGCCC GCGATCATGA ACTGGGACAA GCGCTGGCTC GACGGCAAGG TCTATACGAC GGGCCTGAAG GAAGCCGCCG AGAAGTACAT TCCCGAGATG CGCGCGAAGG GCGCGGACCT CGTCGTCGCG ATCTCGCACG GCGGGCTCGA CAACTCGCCG TACTCGCCGA CGATGGAAAA CGGCAGCTGG TGGCTGTCCA CCGTGCCCGG CATCGACACG ATGCTGATCG GCCACTCGCA CCAGGTGTTC CCCGACGCGA CGAGCACCGT CGCGCAGTTC AACCTGCCGG GCGTCGACAA GGTCAAGGGC ACGGTCAACG GCGTGCCGAC CGTGATGGCG AACTACTGGG GCAAGCACCT CGGCGTGATC AAGCTCGGCC TCGCGTTCGA CGGCAAGACG TGGCGCGTCG ACAAATCGCA GACCACCGTC GAGGCGCGCT CGATCCAGAA CCCGGACAAG AGCTACGTCG ACGCCGATCC GTCGGTGGCC GCGGCGATCG CGGCCGAGCA CCAGGCGACG ATCGACTACG TGAAGACGCC GATCGGCAGC ACCGACTACC GGATGACCAG CTACTTCGCG GACGTGGGCG ATCCGGGCGC GATCCAGCTC GTCAACGAGG CGCAGGCCGA CTACGTCGCG AACTACGTGC AGACGAACCT GCCGCAGTAT GCGTCGCTGC CGGTGCTGTC GGTGAGCGCG CCGTTCAAGA GCGGCTTCGG CGGCGGCACC GATTTCACCG ACGTCGCGGC GGGCGCGCTC GCGATCAACA ACGCGGCCGA TCTCTACCTG TATCCGAACA CGGTCTACGC GGTGAAGGTG AGCGGCGCGG ACATCAAGAA CTGGCTCGAG ACCGCGGCGA AGCGCTTCAA CACGATCGAC CCGACGAAAG CGACCGTGCA GAAGCTCGTG AGCACGTTCC CCGGCTACAA CTTCGACATG TTCACGTCCG CCGATCTGCG CTACGAGATC GACGTCACGC AGCCGGTGGG CAGCCGGATC CGCAACCTCG CGTACAAGGG CGCGCCGATC GATCCGAATG CGCAGTTCAT CGTCGCGACG AACAACTACC GCGCGAGCGG CGGCGGCAAC TTCCCCGGCC TGGACGGCAG CAAGACGATC TTCGCGTCGC CCGACGCGAA CCGCGACGTG CTGATCGCAT ACATCAAGAA GCGCGGCCGG ATCACGCGCG CGGCGGACGG CATGCAGCGC AGTTGGCGCT TCACGAAGCT CGCGGGCTCG GTCGCGCACG TGCAGTTCGC GTCGGCGCCG AACCTCGCGG CGCTCGCGAG CACCGCGGGC CTCGCGGGCA TCACGCAAGT CGCGGCCGAC GACGGCTCCG GCAAGGGACT CGCGACTTAC GAGATCGATC TGACGCAATG A
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Protein sequence | MPFPLRFRRR RLAAALVACA ALVAGCNDDV DSPGAQSGAS APAGTKATLA VLETTDLHTN VLSYDYFKLA ADKSLGFERV ATLIAQARAQ YPNTLLLDNG DTIQGTALAD YQALVKPVSC GETLAIYKVM NAAKFDGGGI GNHEFNYGLP YLSQVTGNAF AVDGLPDPAR QKKCAGPDFP QVLANVISAK TNAPLFTPYT ILTKNVTATT PDGRTVTAPV KVGIIGFTPP AIMNWDKRWL DGKVYTTGLK EAAEKYIPEM RAKGADLVVA ISHGGLDNSP YSPTMENGSW WLSTVPGIDT MLIGHSHQVF PDATSTVAQF NLPGVDKVKG TVNGVPTVMA NYWGKHLGVI KLGLAFDGKT WRVDKSQTTV EARSIQNPDK SYVDADPSVA AAIAAEHQAT IDYVKTPIGS TDYRMTSYFA DVGDPGAIQL VNEAQADYVA NYVQTNLPQY ASLPVLSVSA PFKSGFGGGT DFTDVAAGAL AINNAADLYL YPNTVYAVKV SGADIKNWLE TAAKRFNTID PTKATVQKLV STFPGYNFDM FTSADLRYEI DVTQPVGSRI RNLAYKGAPI DPNAQFIVAT NNYRASGGGN FPGLDGSKTI FASPDANRDV LIAYIKKRGR ITRAADGMQR SWRFTKLAGS VAHVQFASAP NLAALASTAG LAGITQVAAD DGSGKGLATY EIDLTQ
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