Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BCZK4896 |
Symbol | pdaA |
ID | 3026865 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus cereus E33L |
Kingdom | Bacteria |
Replicon accession | NC_006274 |
Strand | + |
Start bp | 4984949 |
End bp | 4985686 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 637549129 |
Product | polysaccharide deacetylase |
Protein accession | YP_086466 |
Protein GI | 52140364 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.434213 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCAAGC GAGTATTTCA ATACATTATT TTATTTTTAA CGATTACTAT GTACGCGTCA CCTCATGCAG GAGCAACTAC AATTCCCCCT GCTGAACATC ATCCAAATAC CGAACCTACT TCTTCTACAA AAAAAATCGC GTACTTAACA TTTGATGACG GACCAAACAA ATATACTACG CAAATTTTAA ACATCTTAAA AGAAAAGAAC GGAAAAGCAA CTTTCTTTGT TATTGGTGGA AAAGTACCAC ATTATAAAAA GACAATGCAA CGATTAATTA AAGATGGACA TTATATTGGA CTTCACAGTA TGTCACATGA TGTAAAACGC CTTTACACCG GTGATCCATC TGCTTTAATT ACAGAAATGG AACAAACACA AAACATTGTT CAACAAGTTA CAAAATTAAA TACACATCTC GTTCGTGTCC CGTACGGTAG CATGCCTTAC TTAAAGAAGA ATTATCGTGA TGCACTTGTA TCAGCCCAGT ATAAAATGTG GGATTGGACA ATCGATACAT ACGACTGGAA AAGCTATGAC AATCCTTCTG CCATACTAGA AAGGGTACGT AATCAGAGCG ATGAACAAGT CGAAGTGATT TTAATGCATG ATTCGAGTGT AACCTTACAA ATACTGCCAC AAGTAATTGA TTACTTACAG TCACAAGGAT ACAAACTTCT TCCCTATAAT CCATCTTCTC ATCTCAAAGT TAATTTTTGG AAAGACACAA GATTGTAA
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Protein sequence | MIKRVFQYII LFLTITMYAS PHAGATTIPP AEHHPNTEPT SSTKKIAYLT FDDGPNKYTT QILNILKEKN GKATFFVIGG KVPHYKKTMQ RLIKDGHYIG LHSMSHDVKR LYTGDPSALI TEMEQTQNIV QQVTKLNTHL VRVPYGSMPY LKKNYRDALV SAQYKMWDWT IDTYDWKSYD NPSAILERVR NQSDEQVEVI LMHDSSVTLQ ILPQVIDYLQ SQGYKLLPYN PSSHLKVNFW KDTRL
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