| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCZK4231 |
|---|
| Symbol | xerD |
|---|
| ID | 3023130 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus cereus E33L |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_006274 |
|---|
| Strand | - |
|---|
| Start bp | 4342341 |
|---|
| End bp | 4343309 |
|---|
| Gene Length | 969 bp |
|---|
| Protein Length | 322 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 637548445 |
|---|
| Product | integrase/recombinase |
|---|
| Protein accession | YP_085810 |
|---|
| Protein GI | 52141019 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4974] Site-specific recombinase XerD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00000000145909 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTAAAA GACGAGATTC TTTAACGGTT AGCGAAGACT TATCGAATAT CTTTGACCGG
AAGCTGGAAA GGAAACAAGT GAAGGGTCTA ACTATTAAGA AGGCTCTCTC TACAGTGATA
CGTCAAATGA GAGCAACAGG CTTGCGTGAC CGTACTATTA GCGACTATGA GTTGCATATT
GGTCATTTTA TGAGTGTGAC GGGTGCTGAG TTTCTCCAAG AGTTGACCGT TGAACATATC
TATTTGTGGC TTTCATCTAT GAATGTCAGT AATCAAACCA AGTTAACACG TTTGAAGTGT
CTCAAAGCGT TTCTGGGACG TTGTTTCGAT AACGGTTGGA TTGAGATTAA CTTTTGGAAG
AGTATCAAAA TAAAGGTTGA TAGCCCTGTA AAAGAGGGGG CAACGGATAG GGAAATTAAT
CTTTTGCTTT CTATTCTAGA TTTAACTCGC TTCATAGAAT TGAGGGATGC TGCTTCTGTA
TTACTTATGT ATCAGACGGG AATACGAGTT GGGACGTTGT CTCAATTGGA GCATAAACAT
GTGAACTTAG AAAATAAAGT GCTACGTATT GATGGTGGAA TTATTAAGAA TCATGAATCT
ATACATTTAC CCTTTGATGA TGTTTTGGCT AGAGTCTTAG GTGCTCTTAT GAAGCAAAAC
GACATTATCA GGAAAGAGTG CCATATAAAG AATGATTACT TATTCATTAC GAAAAATGGA
GGGCGGATCG CTACTAGTCC GACAAATAAC AATATAACTA AGAGGCTGAG TAAACATTCT
AAGGATTACG GTCTGAAGAA TATAAATCCT CATGCCTTAC GGAGAGGGTT TGCGAAGAAT
TTACTTAAGA AGGGAGCAAA TATAGCTTTA ATATCTAAGG CTCTTGGTCA TAGTGATCTA
GCCGTTACAA CAAGATATTT GCATTTAGAT AAGGAAGAAG TAGCTGAAAG TCTTAGAAAC
TTCTTGTAA
|
|---|
| Protein sequence | MSKRRDSLTV SEDLSNIFDR KLERKQVKGL TIKKALSTVI RQMRATGLRD RTISDYELHI
GHFMSVTGAE FLQELTVEHI YLWLSSMNVS NQTKLTRLKC LKAFLGRCFD NGWIEINFWK
SIKIKVDSPV KEGATDREIN LLLSILDLTR FIELRDAASV LLMYQTGIRV GTLSQLEHKH
VNLENKVLRI DGGIIKNHES IHLPFDDVLA RVLGALMKQN DIIRKECHIK NDYLFITKNG
GRIATSPTNN NITKRLSKHS KDYGLKNINP HALRRGFAKN LLKKGANIAL ISKALGHSDL
AVTTRYLHLD KEEVAESLRN FL
|
|---|
| |