Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BCZK4042 |
Symbol | sigA |
ID | 3026972 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus cereus E33L |
Kingdom | Bacteria |
Replicon accession | NC_006274 |
Strand | - |
Start bp | 4150370 |
End bp | 4151491 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637548256 |
Product | RNA polymerase sigma factor RpoD |
Protein accession | YP_085621 |
Protein GI | 52141207 |
COG category | [K] Transcription |
COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
TIGRFAM ID | [TIGR02393] RNA polymerase sigma factor RpoD, C-terminal domain [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000000102439 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGACA AACCAGCTCG TTCTAAACAA ATTGAAACTG AAATGACCCT TGAGCAAGTG AAAGAACAAC TCACTGAGCT CGGAAAAAAA CGTGGCGTTC TTACATATGA AGAGATTGCA GAACGCATGA ATGGATTTGA AATTGAATCC GATCAAATGG ATGAATACTA TGAATATTTA GGTGAACAAG GGATTGACTT AGTTGGCGAC AACGATGAAG GCCCTAATAA TCACCAAATT ACAAAAACAG AAGAAGAGTT TGACCTGAAT GACTTAAGTG TACCACCAGG GGTTAAAATC AACGATCCTG TTCGTATGTA TTTAAAAGAA ATTGGTCGTG TAGATTTACT ATCTGCAGAA GAAGAAATTC GACTTGCAAC GCGTATTGAA GAAGGCGATG AAGAAGCAAA ACGTCGTCTT GCAGAAGCAA ACTTACGTCT TGTAGTAAGT ATTGCAAAGC GCTATGTAGG CCGCGGTATG CTTTTCTTAG ACTTAATCCA AGAAGGGAAT ATGGGTCTAA TTAAAGCGGT TGAAAAGTTC GATTATCGTA AAGGTTTCAA ATTTAGTACG TATGCAACTT GGTGGATTCG CCAAGCAATT ACACGTGCGA TTGCAGACCA AGCAAGAACA ATTCGTATCC CAGTTCATAT GGTTGAAACG ATTAATAAGT TAATTCGTGT ACAACGTCAA TTATTACAAG ATTTAGGACG TGAACCATCT CCTGAAGAGA TTGGTGAAGA AATGGATCTT GCTCCAGAAA AAGTGCGCGA AATCTTAAAA ATTGCTCAGG AGCCAGTCTC TCTTGAAACA CCGATTGGTG AAGAAGATGA CTCCCATTTA GGTGATTTTA TTGAAGACCA AGAAGCAACA TCGCCTGCGG ACCATGCAGC GTATGAATTG CTAAAAGAAC AATTAGAAGA TGTGTTAGAT ACACTAACAG ATCGTGAAGA AAATGTTCTA CGTCTTCGTT TTGGTTTAGA TGATGGACGA ACTCGTACGC TTGAAGAAGT TGGGAAAGTA TTCGGCGTAA CGAGAGAACG TATTCGTCAA ATTGAAGCAA AAGCACTTCG TAAATTGAGA CATCCTAGCC GTAGTAAGCG TCTTAAGGAT TTCTTAGAAT AG
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Protein sequence | MADKPARSKQ IETEMTLEQV KEQLTELGKK RGVLTYEEIA ERMNGFEIES DQMDEYYEYL GEQGIDLVGD NDEGPNNHQI TKTEEEFDLN DLSVPPGVKI NDPVRMYLKE IGRVDLLSAE EEIRLATRIE EGDEEAKRRL AEANLRLVVS IAKRYVGRGM LFLDLIQEGN MGLIKAVEKF DYRKGFKFST YATWWIRQAI TRAIADQART IRIPVHMVET INKLIRVQRQ LLQDLGREPS PEEIGEEMDL APEKVREILK IAQEPVSLET PIGEEDDSHL GDFIEDQEAT SPADHAAYEL LKEQLEDVLD TLTDREENVL RLRFGLDDGR TRTLEEVGKV FGVTRERIRQ IEAKALRKLR HPSRSKRLKD FLE
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