| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCZK3566 |
|---|
| Symbol | pnpA |
|---|
| ID | 3024961 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus cereus E33L |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_006274 |
|---|
| Strand | - |
|---|
| Start bp | 3700012 |
|---|
| End bp | 3702150 |
|---|
| Gene Length | 2139 bp |
|---|
| Protein Length | 712 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 637547782 |
|---|
| Product | polynucleotide phosphorylase/polyadenylase |
|---|
| Protein accession | YP_085148 |
|---|
| Protein GI | 52141682 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
|---|
| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.276153 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCAAG AAAAGCAAGT CTTCTCGATA GATTTAGCTG GTCGCCAGCT AACAGTTGAA
ACAGGTCAGC TTGCAAAGCA AGCGAACGGA GCAGTATTAG TAAGATATGG CGATACAGCG
GTTCTATCTA CAGCAACTGC ATCAAAAGAA GCAAAAAATG TAGATTTCTT CCCACTTACA
GTAAACTATG AAGAGCGTTT ATATGCAGTC GGAAAAATTC CTGGCGGTTT CATTAAACGT
GAAGGTCGTC CAAGTGAAAA AGCAATTTTG GCAAGTCGTT TAATCGACCG TCCAATTCGT
CCGCTTTTCG CTGATGGTTT CCGTAACGAA GTACAAGTTG TCAGCATCGT AATGAGTGTT
GATCAAGATT GTTCTTCTGA AATGGCAGCT ATGCTTGGTT CTTCATTAGC GTTATCGATT
TCAGATATTC CATTTGAAGG TCCAATTGCG GGTGCAACAG TTGGTCGTAT TAACGGCGAA
TTCGTTATCA ACCCAACAGT AGAACAGCAA GAACAAAGTG ACATTCACCT TGTTGTAGCT
GGTACGAAAG ATGCAATTAA CATGGTTGAA GCAGGAGCAG ATCAAGTGCC TGAGGAAACA
ATGTTAGAAG CAATTATGTT TGGTCATGAC GAAATTAAAC GTCTAATTGC ATTCCAAGAA
GAGATTGTAC AAGCTGTAGG TAAAGAGAAA TCAGAAGTGA AACTTTATGA AGTTGACGCT
GATCTTAACC AAGCTGTACG TGAAATGGCT GAGAAGGATA TGCATTCTGC AATTCAAGTA
CATGAGAAAC ATGCACGTGA AGATGCAATT AACGAAGTGA AAAAGCGTGT AATTGAGCAT
TACGAAGCGC AGGAAGCTGA CGCTGATACT TTAGGACAAG TAAATGAGAT TTTATATAAA
ATTGTAAAAG AAGAAGTACG TCGTCTTATT ACAGTTGAAA AAATCCGCCC AGATGGCCGT
AAAGGTGACG AAATCCGTCC ATTAGCATCA GAGGTTGGCA TTTTATCTCG TACACACGGT
TCTGGTTTGT TCACTCGTGG ACAAACACAA GCATTAAGTA TTTGTACATT AGGTGCATTA
GGCGATGTGC AAATTTTAGA CGGTCTTGGT GTAGAAGAAT CAAAACGCTT TATGCACCAT
TACAATTTCC CATCATTTAG TGTTGGTGAA ACAAGACCGA TGCGTGGACC AGGTCGTCGT
GAAATCGGTC ACGGTGCACT AGGAGAACGT GCTCTTGAAC CTGTAATTCC ATCTGAAAAA
GACTTCCCAT ACACAGTACG TCTTGTGTCT GAAGTATTAG AATCAAATGG TTCTACTTCA
CAAGCAAGTA TTTGTGGTAG TACTTTAGCA ATGATGGATG CTGGTGTTCC ACTTAAAGCT
CCAGTTGCAG GTATTGCAAT GGGGCTAGTT AAAACTGGTG AGCATTACAC AATTTTATCT
GATATTCAAG GTATGGAAGA TCATTTAGGT GATATGGACT TTAAAGTAGC AGGTACAGCA
CATGGTGTAA CTGCATTACA AATGGACATT AAAATCGATG GTCTATCTCG TGAAATTTTA
GAAGAGGCAT TACAACAAGC GAAAGTTGGT CGTGTGCACA TTCTAAATCA TATGTTATCT
GTTATTGCAG AGCCACGCAC TGAATTATCA GCGTACGCTC CAAAGATTAT TACAATGACA
ATTAACCCAG ATAAAATCCG TGACGTTATC GGACCAAGCG GTAAACAAAT CAATAAAATT
ATTGAAGAAA CTGGCGTTAA AATTGACATC GAGCAAGATG GTACAGTATT CATTTCTTCA
ATAAATCAAG AAATGAACGA CAAAGCTAAG AAAATTATCG AAGATATCGT TCGCGAAGTA
CAAGTAGGTG AAATCTACGA AGGAAAAGTG AAACGTGTTG AGAAATTCGG TGCTTTCGTT
GAATTATTCA GCGGTAAAGA TGGATTAGTT CACATTTCTG AACTTGCACT TGAGCGTGTA
GGTAAAGTAG AAGACGTTGT GAAAATCGGT GATGTAATTA CAGTTAAAGT TATCGAGATT
GACAAGCAAG GTCGCGTGAA TCTATCTAGA AAAGTATTGC TAAAAGAAGA GCAAGAAAAA
GAAGCTGCTA AAGAAGAAAA TAAACAAGAG CAGCAATAA
|
|---|
| Protein sequence | MSQEKQVFSI DLAGRQLTVE TGQLAKQANG AVLVRYGDTA VLSTATASKE AKNVDFFPLT
VNYEERLYAV GKIPGGFIKR EGRPSEKAIL ASRLIDRPIR PLFADGFRNE VQVVSIVMSV
DQDCSSEMAA MLGSSLALSI SDIPFEGPIA GATVGRINGE FVINPTVEQQ EQSDIHLVVA
GTKDAINMVE AGADQVPEET MLEAIMFGHD EIKRLIAFQE EIVQAVGKEK SEVKLYEVDA
DLNQAVREMA EKDMHSAIQV HEKHAREDAI NEVKKRVIEH YEAQEADADT LGQVNEILYK
IVKEEVRRLI TVEKIRPDGR KGDEIRPLAS EVGILSRTHG SGLFTRGQTQ ALSICTLGAL
GDVQILDGLG VEESKRFMHH YNFPSFSVGE TRPMRGPGRR EIGHGALGER ALEPVIPSEK
DFPYTVRLVS EVLESNGSTS QASICGSTLA MMDAGVPLKA PVAGIAMGLV KTGEHYTILS
DIQGMEDHLG DMDFKVAGTA HGVTALQMDI KIDGLSREIL EEALQQAKVG RVHILNHMLS
VIAEPRTELS AYAPKIITMT INPDKIRDVI GPSGKQINKI IEETGVKIDI EQDGTVFISS
INQEMNDKAK KIIEDIVREV QVGEIYEGKV KRVEKFGAFV ELFSGKDGLV HISELALERV
GKVEDVVKIG DVITVKVIEI DKQGRVNLSR KVLLKEEQEK EAAKEENKQE QQ
|
|---|
| |