Gene BCZK3096 details

Gene Information

• Locus tag: BCZK3096
• Symbol: ribD
• ID: 3023154
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Bacillus cereus E33L
• Kingdom: Bacteria
• Replicon accession: NC_006274
• Strand: -
• Start bp: 3228031
• End bp: 3229134
• Gene Length: 1104 bp
• Protein Length: 367 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 637547317
• Product: riboflavin biosynthesis protein; diaminohydroxyphosphoribosylaminopyrimidine deaminase
• Protein accession: YP_084683
• Protein GI: 52142146
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0117] Pyrimidine deaminase; [COG1985] Pyrimidine reductase, riboflavin biosynthesis
• TIGRFAM ID: [TIGR00227] riboflavin-specific deaminase C-terminal domain; [TIGR00326] riboflavin biosynthesis protein RibD; [TIGR01508] 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine 1'-reductase, archaeal

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTTGAGC ATGAATTGTA TATGAAGTTA GCACTAGAAA ATGCCAAGGC TATGAAGGGA 
CAAACGACTC CAAATCCACT GGTTGGATCT GTAATTGTAA ATGATAACCG AATTGTAGGG 
ATTGGAGCAC ATATGAAGGC TGGAGAACCA CATGCTGAAA TACATGCGAT ACGTATGGCG 
GGAGAACAGG CGTGTGGTGG TACAATCTAT GTAACTCTTG AACCTTGTTC TCATCATGGA 
AGAACAGGCC CTTGTGCAGA AGCAATTGTA CAAGCAGGAA TTAAGAAGGT AGTAGTTGCT 
ACACTTGATC CAAATCCACT TGTTTCTGGA CGTGGAATTA AAATTCTGCA AGATGCTGGT 
ATTGAAGTGC TTGTAGGAGT GTGTGAAGAA GAATCTAAAA AGATGAATGA AGTCTTTAAT 
AAATATATTT TGACAAAGCG CCCATTTATA ACGATTAAAT CGGGTGTTAC ATTAGATGGG 
AAAATTGCTA CTTCTTTATC GGATAGTAAG TGGATCACAT CTACAGAAGC GAGACAGGAA 
GTACACCAAA TACGAAATGA AAATGCAGCC ATTTTAGTAG GAGCAAATAC TGTACAAAAG 
GATAATCCAT CATTGACAAC GCGTATTCCA AATGGGCGAA ATCCAATTCG AGTAATATTG 
GACTCAACAT TACGCATACC AATGGAAGCT AACGTTGTTA CAGATGGAGA AGCTCCTACC 
TGGATATTTA CAACAAGTAA TCATGCAGCG GAAAAAAAGA AAGCATTAGA AAATGCAGGA 
GTCAAAATAT TTGTTACTAG CGGAGAAAAG CATATAAACT TATATGAAAT GCTTGATGTT 
TTAGGGGGAA AAGGAGTTTC CTCCCTGCTT ATTGAAGGTG GTGGAGAGGT AAATGCTTCG 
TTTATTGAAA ATAAATTAAT AGATAAACTT ATTTTATATA TTGCACCTAA AATGATTGGG 
GGTAGAATGG CGCCTAGCTT TGTAGAGGGG GCTGGTATTA CTAAAATGCA AGATGCAATT 
GAATTTAAGG ATATATCATT TACCCAGGTT GGAAAAGATT ATAGATTTAT TGGTTACCCA 
GAATATCGGA AAGGTGAAAA ATAA 

 

Protein sequence

MLEHELYMKL ALENAKAMKG QTTPNPLVGS VIVNDNRIVG IGAHMKAGEP HAEIHAIRMA 
GEQACGGTIY VTLEPCSHHG RTGPCAEAIV QAGIKKVVVA TLDPNPLVSG RGIKILQDAG 
IEVLVGVCEE ESKKMNEVFN KYILTKRPFI TIKSGVTLDG KIATSLSDSK WITSTEARQE 
VHQIRNENAA ILVGANTVQK DNPSLTTRIP NGRNPIRVIL DSTLRIPMEA NVVTDGEAPT 
WIFTTSNHAA EKKKALENAG VKIFVTSGEK HINLYEMLDV LGGKGVSSLL IEGGGEVNAS 
FIENKLIDKL ILYIAPKMIG GRMAPSFVEG AGITKMQDAI EFKDISFTQV GKDYRFIGYP 
EYRKGEK