Gene BCZK2243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBCZK2243 
SymbolrpoD 
ID3025204 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus cereus E33L 
KingdomBacteria 
Replicon accessionNC_006274 
Strand
Start bp2370728 
End bp2371267 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content30% 
IMG OID637546467 
ProductRNA polymerase sigma-70 factor 
Protein accessionYP_083833 
Protein GI52142997 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0167321 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAAATGG AACAGACGTT TATTGAAAAG TGTAATCATG ATGAGCTGGA CTATGTTATA 
AAAGAATATT GGCAAGATGT ATGGAATTAT TCATTTATTA TTACGAAAGA TCCACACTTA
TCAGATGATA TTACGCAAGA TGTATTTATA AAGGTATTTA AAAATTGGAA TTCATTTCGA
AAGGAGTCAT CTATTAAAAC GTGGATATTA AAAATCACAA GAAATACGGC AATAAACTAT
TTGAAATCAT CTTATTTTAA AAGAATATCT TTAGTAGGAT TTTTTAGTGA CGATAAACAA
ACTCTGTCGG CAGAACAAGA GTTTTTTAAG CAAGAAGAAA TGAATGATGT GTGGAAAGTT
GTATTAAAAC TACCTAAAAA GCACCGCGAA ATAATAATAT TGGACGCAAA ATATGAACTA
TCTTATGAAG AAATGGCTGA AACACTAGGA GTATCCATTG GAACTGTAAA ATCTAGATTA
AGTAGAGCAA GAAGTAAGGT TTCAAAATTA ATAGGGGAGG GTGGTAGTGA TGAACAATAA
 
Protein sequence
MEMEQTFIEK CNHDELDYVI KEYWQDVWNY SFIITKDPHL SDDITQDVFI KVFKNWNSFR 
KESSIKTWIL KITRNTAINY LKSSYFKRIS LVGFFSDDKQ TLSAEQEFFK QEEMNDVWKV
VLKLPKKHRE IIILDAKYEL SYEEMAETLG VSIGTVKSRL SRARSKVSKL IGEGGSDEQ