Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BCZK2243 |
Symbol | rpoD |
ID | 3025204 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus cereus E33L |
Kingdom | Bacteria |
Replicon accession | NC_006274 |
Strand | + |
Start bp | 2370728 |
End bp | 2371267 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 637546467 |
Product | RNA polymerase sigma-70 factor |
Protein accession | YP_083833 |
Protein GI | 52142997 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0167321 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGAAATGG AACAGACGTT TATTGAAAAG TGTAATCATG ATGAGCTGGA CTATGTTATA AAAGAATATT GGCAAGATGT ATGGAATTAT TCATTTATTA TTACGAAAGA TCCACACTTA TCAGATGATA TTACGCAAGA TGTATTTATA AAGGTATTTA AAAATTGGAA TTCATTTCGA AAGGAGTCAT CTATTAAAAC GTGGATATTA AAAATCACAA GAAATACGGC AATAAACTAT TTGAAATCAT CTTATTTTAA AAGAATATCT TTAGTAGGAT TTTTTAGTGA CGATAAACAA ACTCTGTCGG CAGAACAAGA GTTTTTTAAG CAAGAAGAAA TGAATGATGT GTGGAAAGTT GTATTAAAAC TACCTAAAAA GCACCGCGAA ATAATAATAT TGGACGCAAA ATATGAACTA TCTTATGAAG AAATGGCTGA AACACTAGGA GTATCCATTG GAACTGTAAA ATCTAGATTA AGTAGAGCAA GAAGTAAGGT TTCAAAATTA ATAGGGGAGG GTGGTAGTGA TGAACAATAA
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Protein sequence | MEMEQTFIEK CNHDELDYVI KEYWQDVWNY SFIITKDPHL SDDITQDVFI KVFKNWNSFR KESSIKTWIL KITRNTAINY LKSSYFKRIS LVGFFSDDKQ TLSAEQEFFK QEEMNDVWKV VLKLPKKHRE IIILDAKYEL SYEEMAETLG VSIGTVKSRL SRARSKVSKL IGEGGSDEQ
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