Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BCZK2206 |
Symbol | rpoE |
ID | 3023603 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus cereus E33L |
Kingdom | Bacteria |
Replicon accession | NC_006274 |
Strand | + |
Start bp | 2334211 |
End bp | 2335080 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 637546431 |
Product | RNA polymerase sigma factor SigJ |
Protein accession | YP_083797 |
Protein GI | 52143032 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family [TIGR02957] RNA polymerase sigma-70 factor, TIGR02957 family |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.371441 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAACGG AGCAATTATA TGAAGCGTAT CAACCATTAT TATTTTCATT AGCATATAGA ATCCTTGGGA GTGTTATGGA TGCTGAGGAT ATCGTTCAGG ATGTATTTAT CTCATTAAAT AATATAGAAG ATCTTCAGTC TATAGAAAAT ATGAAAGCGT ATTTGTGTAA GATGGCGACA AATCGTTCAA TTGATAAATT ACGTTCGGCA GCGTATAAAC GTAACGTATA CGTAGGGATG TGGTTGCCAG AACCACTAGT AGAAGAAAGT AATGAGCCAT CAGAGTCATT TGCAATGAAA GAATCCCTTT CCACCGCATA TTTATTACTT TTACAACAAT TGTCTGAGGT AGAAAGGATT GTTTTCATAT TAAGAGAGGT TTTCAGTTAT GAATACGAAG AAATAGCTTC GATTGTTGAT AAGAGTAGCG TAAACTGTAG AAAGATTTTT CAACGGGCAC GAAAAAGTAT ATTGGATAAG CCGAAGCAAT CGACATTAAG TACGAAGAAA ATGGCTGCTT ACGTTGAAAA GTTTGTATCA TCCTTACAGT GTGGGGATGC GCAAGGTATG TTAGAAGTAT TAAAAACAGA TGCTGTACTC AAAGCTGATG GTGGTGGTAA AGTTACGACT GCGATTCATC CGATCTATTC TGCGGATCGA ATTATACGTT TGTTCTTTGG GATTGTGCAA CGATTGACAA AAGAGTATAC TGTTGATTTC AAAATGGTAA ATGGTATGCC AGGAGTTATA GTTACAATAA ATAATAAAAT AACATATGTT CTTTCGTTCG CATTTGAAGA TGAGAAGATT TCAAACATTT ATATGGTAGT TAATCCTGAG AAACTTATGC ATTTAAATGT AAAAATATAA
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Protein sequence | METEQLYEAY QPLLFSLAYR ILGSVMDAED IVQDVFISLN NIEDLQSIEN MKAYLCKMAT NRSIDKLRSA AYKRNVYVGM WLPEPLVEES NEPSESFAMK ESLSTAYLLL LQQLSEVERI VFILREVFSY EYEEIASIVD KSSVNCRKIF QRARKSILDK PKQSTLSTKK MAAYVEKFVS SLQCGDAQGM LEVLKTDAVL KADGGGKVTT AIHPIYSADR IIRLFFGIVQ RLTKEYTVDF KMVNGMPGVI VTINNKITYV LSFAFEDEKI SNIYMVVNPE KLMHLNVKI
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