Gene BCZK1578 details

Gene Information

• Locus tag: BCZK1578
• ID: 3022798
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Bacillus cereus E33L
• Kingdom: Bacteria
• Replicon accession: NC_006274
• Strand: +
• Start bp: 1659463
• End bp: 1660029
• Gene Length: 567 bp
• Protein Length: 188 aa
• Translation table: 11
• GC content: 33%
• IMG OID: 637545806
• Product: RNA polymerase factor sigma-70
• Protein accession: YP_083172
• Protein GI: 52143656
• COG category: [K] Transcription
• COG ID: [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
• TIGRFAM ID: [TIGR02937] RNA polymerase sigma factor, sigma-70 family

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.000000134399
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAATCAA ATGAGAAAAA TTATATAAAA AGATTAAAGC GACAAAAAGA AGATGCGCTA 
GAATTTGTTG TTGATACATA CTTACCACTC ATAAAAGGAA TCGCGCACAA AGTTCTTCTT 
CCTGTTCAAA ATGATGGATT AATAGAGGAA TGTGTAAACG ATATATTTCT TTCCATATGG 
AATAACGCAA ATAAATTTCA TGGAGAACCA AATGATTTTA AAAAGTGGAT TGCGGCAATT 
GCGAAGTTTA AAGCAATTGA TTATTACCGG AAAGCGACTA AAAAAGTAGA AATTATTTCG 
GATGAGTTTC ATATTAGTAC AGAAAAGTCA GCGGAAGACG AATTAATTGT TATGGAAGAT 
AGAGAAGAAT TATTGAAGCT TATTAATCAA TTAGAACCGC TAGATCAAAA AGTATTCATT 
ATGAAATATT TACTCGGTAT GAAGACAGAG GAAATAGGTG ACAAGTTAGG ATTAACCCGG 
GCAGCAATCG ATAATCGAGT GTACCGGGGG AAAAAGAAGC TACAACAAAA TGCTACGAAT 
ATTAGTTTTG GAGGTAGTGC CATATGA 

 

Protein sequence

MKSNEKNYIK RLKRQKEDAL EFVVDTYLPL IKGIAHKVLL PVQNDGLIEE CVNDIFLSIW 
NNANKFHGEP NDFKKWIAAI AKFKAIDYYR KATKKVEIIS DEFHISTEKS AEDELIVMED 
REELLKLINQ LEPLDQKVFI MKYLLGMKTE EIGDKLGLTR AAIDNRVYRG KKKLQQNATN 
ISFGGSAI