| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCZK1190 |
|---|
| Symbol | glcD |
|---|
| ID | 3025888 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus cereus E33L |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_006274 |
|---|
| Strand | - |
|---|
| Start bp | 1291546 |
|---|
| End bp | 1292958 |
|---|
| Gene Length | 1413 bp |
|---|
| Protein Length | 470 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 637545423 |
|---|
| Product | (S)-2-hydroxy-acid oxidase, subunit D |
|---|
| Protein accession | YP_082789 |
|---|
| Protein GI | 52144038 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
|---|
| TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAGAAA AACAAATTAT TGATTCATTC GTATCCATTG TTGGCGAAGA TAATGTGGAT
ACATCCAATA TGGGGCGTTT AACGTATAGT TATGATGCCA CTCCAAACTT CCAAGCAATG
CCTGATGCAG TCATTGCTCC TCGTAATACA AATGAAGTAG CTGAAGTGTT AAAAGTATGT
AACACTCACA AAATTCCTGT ATATGTTCGT GGTTCCGGGA CGAACCTTTG CGCAGGAACA
TGTCCACTTG AAGGCGGTAT CGTCCTTATC TTCCGACATA TGAATAACAT TTTAGAAATT
GATGAAGAAA ATTTAACAAT TACTGTACAA GCTGGTGTTA TTACGCTTGA TATTATTAAA
GCGGTGGAAG AAAAAGGTTT ATTTTATCCA CCAGATCCAA GCTCAATGAA AATTTCTACA
ATTGGCGGTA ACATTAATGA AAACTCGGGT GGATTACGTG GATTAAAATA TGGCGTAACA
CGTGATTATG TGATGGGGCT TGAACTTGTC TTACCAAATG GTGATATTAT TCGTACCGGT
GGTAAATTAG CCAAAGATGT AGCTGGTTAC GATTTAACTC GTTTATTTAT CGGTTCTGAA
GGGACTCTTG GCGTCGTAAC AGAAGCAATA TTAAAACTTG TCCCTATGCC TGAAACGAAG
AAAACGATGC TTGCACTATA TGAAGATATT AACGAAGCTG CACGTGCTGT TTCTTCTATT
ATTGCAAATA AAATCATTCC AGCGACACTT GAGTTTTTAG ACCAGCCGAC AATTGAAGTA
GTAGAAGAGT TTGCTCAAAT CGGTTTACCA ACTGACGTAA AAGCAATTTT ATTAATTGAG
CAAGACGGTC CGCCTGAAGT TGTTAATCGA GATATTGAAA AAATGGCTAA CGTTTGTCGT
TCCATGAATG CAGTTGATGT TCGCGTCGCA AAAGATGAAG CGGAAGCAGA TGCGCTTCGA
ACAGCTCGCC GTAGTGCACT GTCAGCACTG GCAAGATTAA AGCCTACTAC AATATTAGAA
GATGCAACGG TACCACGCTC ACAGATTGCT CCGATGGTTG AAGCTATTAA TGCCATTGCC
AAAAAATATA ATATTCCTAT TTGTACGTTT GGGCATGCTG GCGATGGCAA CCTACACCCA
ACTTGTATGA CAGATGCTCG CAACGAAGAA GAAATGCACC GAGCTGAACA AGCTTTTGCT
GAAATATTTG CGAAAGCAAT CGAACTTGGT GGCACAATCA CTGGTGAACA TGGTGTTGGT
GCGATGAAAG CTCCGTATTT AGAAATGAAG TTAGGTAAAG AAGGTATTGC CGCTATGCAA
GGAATTAAAC ACGCCTTCGA TCCAAATAAC ATTATGAATC CAGGAAAGAT GTTCGCGAAG
GACACTCGTA AAAGAGTGGT GGTTGAGCGA TGA
|
|---|
| Protein sequence | MLEKQIIDSF VSIVGEDNVD TSNMGRLTYS YDATPNFQAM PDAVIAPRNT NEVAEVLKVC
NTHKIPVYVR GSGTNLCAGT CPLEGGIVLI FRHMNNILEI DEENLTITVQ AGVITLDIIK
AVEEKGLFYP PDPSSMKIST IGGNINENSG GLRGLKYGVT RDYVMGLELV LPNGDIIRTG
GKLAKDVAGY DLTRLFIGSE GTLGVVTEAI LKLVPMPETK KTMLALYEDI NEAARAVSSI
IANKIIPATL EFLDQPTIEV VEEFAQIGLP TDVKAILLIE QDGPPEVVNR DIEKMANVCR
SMNAVDVRVA KDEAEADALR TARRSALSAL ARLKPTTILE DATVPRSQIA PMVEAINAIA
KKYNIPICTF GHAGDGNLHP TCMTDARNEE EMHRAEQAFA EIFAKAIELG GTITGEHGVG
AMKAPYLEMK LGKEGIAAMQ GIKHAFDPNN IMNPGKMFAK DTRKRVVVER
|
|---|
| |