Gene BCZK0557 details

Gene Information

• Locus tag: BCZK0557
• Symbol: rpoD
• ID: 3025470
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Bacillus cereus E33L
• Kingdom: Bacteria
• Replicon accession: NC_006274
• Strand: +
• Start bp: 651171
• End bp: 651728
• Gene Length: 558 bp
• Protein Length: 185 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 637544773
• Product: RNA polymerase sigma factor
• Protein accession: YP_082163
• Protein GI: 52144667
• COG category: [K] Transcription
• COG ID: [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
• TIGRFAM ID: [TIGR02937] RNA polymerase sigma factor, sigma-70 family

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.000000000000417875
• Plasmid hitchhiking: No
• Plasmid clonability: unclonable

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAGTTA CAGACAACGA TTATGAAAAG ATGGAAGAGC TATATGAGTT GTACGAACAA 
AAAGTTTATT ATGTAGCTTA TTCTATTTTA AATAATATTC AACAGGCGGA AGATGCGGTT 
CAAGAGACGT TTATTACTCT TTATAAGAAC TTGGAAAAGC TCCATAGCTT GGCTACTGAA 
GAGCTTAAAC GCTACATTTT GAGGGTCGCG AAAAACAAGG CGATTGATAG TTATCGGAAA 
AATAAACGAC ATGAAACATT TTTAGAAGAA TATGAAAGAG AATCAATAGA AGCGGTAGAT 
GAAAATATTG AAGAGTGGGA AAAACGTAAA ATGTCTGAAG TGCAAATTGA TACATTGCTA 
AAAGAGTTAA ATGAGTCTAA TAGACATGTG TTTAAGTACA AAGTCTTCTA TAACTTAACG 
TATCAAGAAA TTTCAAGTGT CATGGGGATA ACGGAGGCTA ATGTTCGCAA GCAGTTTGAA 
CGCGCTCGAA AACGAGTCCA AAATATGATA GGAGGTATAC AACATGACGA ATTCAAAGAA 
CTCCAAAGAA ATATATGA 

 

Protein sequence

MKVTDNDYEK MEELYELYEQ KVYYVAYSIL NNIQQAEDAV QETFITLYKN LEKLHSLATE 
ELKRYILRVA KNKAIDSYRK NKRHETFLEE YERESIEAVD ENIEEWEKRK MSEVQIDTLL 
KELNESNRHV FKYKVFYNLT YQEISSVMGI TEANVRKQFE RARKRVQNMI GGIQHDEFKE 
LQRNI