Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BCZK0279 |
Symbol | ligA |
ID | 3023912 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus cereus E33L |
Kingdom | Bacteria |
Replicon accession | NC_006274 |
Strand | + |
Start bp | 327211 |
End bp | 329220 |
Gene Length | 2010 bp |
Protein Length | 669 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637544479 |
Product | NAD-dependent DNA ligase LigA |
Protein accession | YP_081888 |
Protein GI | 52144941 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAAAAG AGATAGCAAA AAAACGTATA GAAGAACTAC GTGATTTGTT AAATACATTT AACTATCAAT ATCACGTATT AGACAATCCT TCTGTTTCTG ATGCGGAGTA CGACCGTAAT ATGCAGGAGC TTATAAAATT AGAAGCAGAG AATCCAGAGT TTATGAGTGA AGATTCTCCC TCCGTTCGCG TTGGGGGAAC GGTTCTTGAT ATATTTGAAA AAGTAACACA TAAGTCACCG ATGTTAAGTT TAGGAAATGC ATTTAACGAA GGAGATTTAC GTGATTTTGA CCGACGAGTA CGTCAAGGAA TTGATGATGC GAATGTAAGA TATATATGCG AATTAAAAAT TGACGGACTT GCTGTTTCAC TTCATTATGA AAAAGGACGC TTCATTCAAG GGGCAACACG TGGTGATGGT GTAACAGGTG AAGATATTAC CCAAAATTTA AAAACGATTA AAGCAATCCC GCTTCGTTTA AATGAAGAAG TAACGTTAGA AGCACGAGGC GAAGCTTATA TGCCGAAGCG TTCATTCGTT AAGTTAAATG AAGAAAAAGA GCAAAATGGT GAAGATGTAT TTGCGAATCC GCGTAATGCG GCAGCAGGTT CAATCCGCCA ACTTGATCCG AAAATTGCAG CGAAGCGTAA CTTATCTATG TTTGTATACG GTCTTGCGAA TGTAGAAGAA AAAACAATTC CATCACATAG TGAATCGCTT GATTTCTTAG GTGAACTTGG ATTCAAAACA AATCCAAATC GTCGTACATG TGAAACAATT GAAGAAGTTA TAGCTTATGT AGAAGAATGG CAAGAAAAAC GTCCGCATCT TGATTATGAG ATTGATGGGA TCGTTATAAA AGTAGATGAT GTTGCTCTTC AAGAAAGTCT AGGAACTACA GCAAAGAGTC CAAGATGGGC GATTGCTTAT AAATTCCCAG CGGAAGAAGT TGTAACAAGA TTAACGGGCA TTGAATTAAG TGTTGGTCGT ACAGGGGTTG TAACACCGAC TGCAGAGCTA GAGCCAGTGC GAGTGGCTGG TACGATCGTT CGTCGTGCTT CTTTACATAA CGAAGATTTA ATTCGTGAAA AAGATATTCG AATTGGTGAC TACGTTGTTG TGAAGAAAGC TGGAGATATT ATTCCTGAAG TTGTAAATGT TATTTTTGAT AAGCGTACTG GTGAGGAAGA AGAATATCAT ATGCCAACGC ATTGCCCAGC ATGTGAGAGT GAACTAGTTC GTTTAGAAGA AGAGGTAGCA CTTCGTTGTA TAAATCCAAC TTGTCCTGCT CAAATTCGAG AAGGGTTAAT CCATTTCGTT TCAAGAAATG CAATGAATAT TGATGGTCTT GGAGAACGTG TCATTACACA ACTCTTTGAT GCTGATTATA TTCGTACATT TGCGGATTTA TATTCGTTGA CGAAAGAGCA ATTATTACAG TTAGAACGAT TCGGAGAAAA ATCAGCAACG AATTTAGTAC AAGCAATTGA GAATTCTAAA GAAAACTCAT TAGAGCGATT ATTATTCGGT CTTGGTATTC GCCATGTCGG AGCGAAAGCA GCACGTACAT TTGCAGAGCA TTTCGAAACG ATGGATGCAC TTGTGAAAGC GACGGAAGAA GAATTAAAAA CAATTAACGA GATTGGTGAA AAAATGGCTC AATCCGTCGT GGCGTATTTT GATAATGAAG ACGTATTAGA GCTATTACAA CAATTTAAAG AGTATGGCGT GAATATGACA TACAAAGGTA TAAAAATTGC TGATTTACAA AATGTTGAGT CGTACTTTGC AGGAAAAACT GTCGTTTTAA CTGGGAAATT AGAAGTTATG GGACGTAGTG AAGCGAAGAA GAAGATTGAG GCATTAGGTG GAAAAGTAAC AGGAAGTGTT AGTAAAAGTA CGGATTTAGT TGTCGCAGGT GAAGCGGCAG GTTCGAAATT AGCACAAGCG GAGAAACATA ATGTTGAGGT TTGGAATGAA GAGAGGTTCT TACAAGAGCT AAATAAGTAA
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Protein sequence | MSKEIAKKRI EELRDLLNTF NYQYHVLDNP SVSDAEYDRN MQELIKLEAE NPEFMSEDSP SVRVGGTVLD IFEKVTHKSP MLSLGNAFNE GDLRDFDRRV RQGIDDANVR YICELKIDGL AVSLHYEKGR FIQGATRGDG VTGEDITQNL KTIKAIPLRL NEEVTLEARG EAYMPKRSFV KLNEEKEQNG EDVFANPRNA AAGSIRQLDP KIAAKRNLSM FVYGLANVEE KTIPSHSESL DFLGELGFKT NPNRRTCETI EEVIAYVEEW QEKRPHLDYE IDGIVIKVDD VALQESLGTT AKSPRWAIAY KFPAEEVVTR LTGIELSVGR TGVVTPTAEL EPVRVAGTIV RRASLHNEDL IREKDIRIGD YVVVKKAGDI IPEVVNVIFD KRTGEEEEYH MPTHCPACES ELVRLEEEVA LRCINPTCPA QIREGLIHFV SRNAMNIDGL GERVITQLFD ADYIRTFADL YSLTKEQLLQ LERFGEKSAT NLVQAIENSK ENSLERLLFG LGIRHVGAKA ARTFAEHFET MDALVKATEE ELKTINEIGE KMAQSVVAYF DNEDVLELLQ QFKEYGVNMT YKGIKIADLQ NVESYFAGKT VVLTGKLEVM GRSEAKKKIE ALGGKVTGSV SKSTDLVVAG EAAGSKLAQA EKHNVEVWNE ERFLQELNK
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