Gene BCZK0162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBCZK0162 
Symbol 
ID3023881 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus cereus E33L 
KingdomBacteria 
Replicon accessionNC_006274 
Strand
Start bp171225 
End bp171716 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content31% 
IMG OID637544338 
ProductECF subfamily RNA polymerase sigma factor 
Protein accessionYP_081778 
Protein GI52145050 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAAAAG AAAATATATT AACCTCCTAT CTTATCAATT TAGGAGAGGA AGTGTTCAAA 
CTATTATTAG CGAAAGGGGC TATAAAAGAA GATGCAGAAG ACATCATCCA AAATACCTTC
TATAAAGTAT ACACATTGCT AGATAGCTTA ACCGAGGATA ACATACGTCC ATGGTTTTTC
AGAGTCGCAT TAAATGAATA CATTGACTTA AAGAGAAAAA AAGAGCAGCA GAACATCTAT
TTGACTGAAG AGATTTATTC AAAATTACAA TATACAGACC GAGAACTGGA TGCTGTTTTA
AATAAAGATG AGATTTTCTA TCTATTAAAA GATATAAAAC TAGAATATAA AGAAGCCTTC
TTTTTAAAGT ATTATTACGA TTTTACATAT GAAGAAATTG CACTAATACT AGATATTCGA
GTAAATAGCG TCAAACAAAA GTTACATCGT GCACGTAAAA CAATTCATTC TACAGTAGGG
GGAAAACCTT AA
 
Protein sequence
MGKENILTSY LINLGEEVFK LLLAKGAIKE DAEDIIQNTF YKVYTLLDSL TEDNIRPWFF 
RVALNEYIDL KRKKEQQNIY LTEEIYSKLQ YTDRELDAVL NKDEIFYLLK DIKLEYKEAF
FLKYYYDFTY EEIALILDIR VNSVKQKLHR ARKTIHSTVG GKP