Gene Mfl586 details

Gene Information

• Locus tag: Mfl586
• Symbol: rpsD
• ID: 2898028
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Mesoplasma florum L1
• Kingdom: Bacteria
• Replicon accession: NC_006055
• Strand: +
• Start bp: 686108
• End bp: 686734
• Gene Length: 627 bp
• Protein Length: 208 aa
• Translation table: 4
• GC content: 31%
• IMG OID: 637520649
• Product: 30S ribosomal protein S4
• Protein accession: YP_053828
• Protein GI: 50365403
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0522] Ribosomal protein S4 and related proteins
• TIGRFAM ID: [TIGR01017] ribosomal protein S4, bacterial/organelle type

Plasmid Coverage information

• Num covering plasmid clones: 50
• Plasmid unclonability p-value: 0.0000000000000352215
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCAAGAT ATACAGGATC AACATTTAAA AAAGCAAGAA GATATGGTTT CTCAATTCTT 
GAGAATGGTA AAGAATTTAG CAAAGGGAAA AAAAGAGTAA CAACTCCAGG TCAACACGGT 
AAAGACAAAG CTCGTTTAAA AATGAGTGGA TATGGTGCTC AATTACAAGA AAAACAAAAA 
GTTAAATTCA TGTATGGAAT GACTGAAAGA CAATTCAGAA ACACATTTGC TAAAGCTAAA 
AAAGTTCACG GTGGAATTTT AGGGACAAAC TTCCTAGTAT TATTAGAATC AAGATTGGAC 
AACATCGTTT TCCGTCTTGG ATTTGCAATG ACTAGACAAG CTGCTCGTCA ATTAGTAAAC 
CACGGACACA TTTTAGTAAA TGGTAAAAAA TTAGACATTC CTTCATACCA AGTAAAACCA 
GGTGATTCAA TTGAAGTTAA AGAAGCTATG AAGAAAAATG ATAAAATTGC TGAAGCATTA 
CAAAATAATG AATCAACAGT TGAATTCGTT AAAGTTGATA AAGCTAATTT AAAAGGTCAA 
TTTGTTAGAT TACCTGAACG TCAAGAATTA AATCTAGAAA TCAACGATGC TTTAATTGTT 
GAATGATACA ACCGTTTAAT TAAATAA 

 

Protein sequence

MSRYTGSTFK KARRYGFSIL ENGKEFSKGK KRVTTPGQHG KDKARLKMSG YGAQLQEKQK 
VKFMYGMTER QFRNTFAKAK KVHGGILGTN FLVLLESRLD NIVFRLGFAM TRQAARQLVN 
HGHILVNGKK LDIPSYQVKP GDSIEVKEAM KKNDKIAEAL QNNESTVEFV KVDKANLKGQ 
FVRLPERQEL NLEINDALIV EWYNRLIK