Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mfl160 |
Symbol | |
ID | 2898189 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mesoplasma florum L1 |
Kingdom | Bacteria |
Replicon accession | NC_006055 |
Strand | + |
Start bp | 181534 |
End bp | 183534 |
Gene Length | 2001 bp |
Protein Length | 666 aa |
Translation table | 4 |
GC content | 27% |
IMG OID | 637520190 |
Product | DNA ligase, polydeoxyribonucleotide synthase NAD+ |
Protein accession | YP_053400 |
Protein GI | 50364975 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 60 |
Plasmid unclonability p-value | 0.0025564 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACTAAAG AACAAGCAAG CAAATTAATT AATGATTTAC GATTAAAACT TAATGAATGA GCAAAAGAAT ATTATGTTTT AGATAACCCT AGTGTTGATG ATGCTGAATA TGACAAAACC ATTCATCAAC TTCTTGATCT TGAAAATCAA TTCCCTGAAT TAATAACATC TGATTCTATA ACTCAAAAAG TTGGCGGAAT TGTAAGTGAT AAATTTGAAA AGCACACACA TAAATATCCA ATGTTAAGTC TTGGTGACAT TTTTTCTTGA GATGAGTTCA TTAACTTTAA TAAACAAGTT GCAAAAGTTA CAGGCACAGA AAACAATGAA TATACTGCAG AACTAAAAAT TGATGGATTA TCAATATCTT TAATTTATAA AGATGGTGTA TTACAAAAAG GTGTGACTCG TGGTGATGGT AAAGTCGGTG AGAATGTTAC AACAAATGTA AAAACAATTA AATCAATACC ATTATCAATA CCTTCAAAAG ATGAAATTGA AATTAGAGGA GAAGTTTTTT TAGGTAAAAA AGAATTTGCA AAAATTAATG AAGAAAGATT ATTGAATGGA GACCAACTTT TTGCCAATCC AAGAAATGCA GCAGCTGGAA CTTTAAGACA ATTAGATTCT AAAATAGTTG CTGAAAGAAA TCTTGATGCT TATCTTTACT ATTATTTCAA CGAAAATAAC CCAATTAATA CACAGTTTGA TTCTATTAAT CAAATAAAGA ATTTAGGTTT AAAAATTAAT AAGGAAACTA AAATTTGTAA GACATTAGAA GAAGTAAAAT TATACATTGA ATATTACACT GAAAAAAGAA ACGAATTAGA TTATGAAATA GATGGTATAG TATTTAAACT AAACGATAAA AAATTACAAG AAGAAGTTGG ATACACAGCA AAAACACCAA AATGAGCAAT TGCTTATAAA TTTCCAGCTG AAGTTAAACA AACTAAATTA TTAGACATAT TTCCCACTGT TGGAAGAACT GGCAAAATTA CATACAACGC TAAGCTAGAA CCTGTGCAAA TTGCTGGAAC AACAGTTTCT GCAGCATCAT TAAACAATGC TGAGTATATA ATGGCAAAAG ACCTTAGAAT AAACTCAATT GTTAAAGTAA AAAAAGCAGG AGATATTATT CCTGAAGTTA TTAGTGCTAT TAAAGATGAA AAATTTGATT TATTACCAAT TTGAGAAAAA GATGTTCAAT GTCCTGCTTG TAATGAACTT TTAGAGAAAA CTTCAACAGA GGTTGATCAA TTTTGTGTTA ACTTTAACTG TCCAGCACAA ATATTAAGAA GTTTAGAACA TTTTGCAAGT AGAGGTGCTG CAAATATAGT TGGTCTTGGT GGTCAAACAA TTAAAAAATT ATTTGAAGAA AAATTAATAA CAAATATTGC AGATATTTTT AAAGTTGAAG AACATAAAGA AAATATAATT AATTTTGAAA AATTTGGAGA AAAAAGTTTT GAAAACTTAA TTGCTTCAAT TAAAGAATCT AAAAATAATT CATTTGAAAA AACTTTATTT GGTTTAGGTA TTAGACACGT TGGTTCTAAG ACTGCTCTAA CTTTAGCTCA AATATATAAA AATATTGATA ATCTAAAAAA TGCAACGTAT GAAGAATTAA GTTCAATAGA CTCAGTTGGA GAAGTGTTGG CTATGTCAAT TGTAGATTGA TTTAAAATTG AGTCTAATTT ACAATTAATT AATGAATTAA AATCATTTGA TGTTAATTTT GAATATTTGG GTCAAGCTAA AAATACCGAA TCAACAATTA GTGAAAAATC TTTTGTAATA ACAGGTACAC TATCTGAATC TAGAGATTAT TTTAAAGATA TAATTGAATT AAACAATGGT AAAGTTATAG GTTCTGTTTC AAAAAAAACT GATTATGTTT TAGCAGGGGA AAATGCTGGA AGTAAATTAA CAAAAGCTGA AGAATTAAAC GTTAAAGTTA TTAATGAAGA AGAGTTCTTT GCAATTCTAA AAGGAGAATA A
|
Protein sequence | MTKEQASKLI NDLRLKLNEW AKEYYVLDNP SVDDAEYDKT IHQLLDLENQ FPELITSDSI TQKVGGIVSD KFEKHTHKYP MLSLGDIFSW DEFINFNKQV AKVTGTENNE YTAELKIDGL SISLIYKDGV LQKGVTRGDG KVGENVTTNV KTIKSIPLSI PSKDEIEIRG EVFLGKKEFA KINEERLLNG DQLFANPRNA AAGTLRQLDS KIVAERNLDA YLYYYFNENN PINTQFDSIN QIKNLGLKIN KETKICKTLE EVKLYIEYYT EKRNELDYEI DGIVFKLNDK KLQEEVGYTA KTPKWAIAYK FPAEVKQTKL LDIFPTVGRT GKITYNAKLE PVQIAGTTVS AASLNNAEYI MAKDLRINSI VKVKKAGDII PEVISAIKDE KFDLLPIWEK DVQCPACNEL LEKTSTEVDQ FCVNFNCPAQ ILRSLEHFAS RGAANIVGLG GQTIKKLFEE KLITNIADIF KVEEHKENII NFEKFGEKSF ENLIASIKES KNNSFEKTLF GLGIRHVGSK TALTLAQIYK NIDNLKNATY EELSSIDSVG EVLAMSIVDW FKIESNLQLI NELKSFDVNF EYLGQAKNTE STISEKSFVI TGTLSESRDY FKDIIELNNG KVIGSVSKKT DYVLAGENAG SKLTKAEELN VKVINEEEFF AILKGE
|
| |