| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BT9727_5125 |
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| Symbol | opuD |
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| ID | 2855403 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bacillus thuringiensis serovar konkukian str. 97-27 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_005957 |
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| Strand | - |
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| Start bp | 5191565 |
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| End bp | 5193133 |
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| Gene Length | 1569 bp |
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| Protein Length | 522 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637516560 |
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| Product | BCCT family osmoprotectant transporter |
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| Protein accession | YP_039434 |
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| Protein GI | 49480460 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1292] Choline-glycine betaine transporter |
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| TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 47 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGATGA AGAGTCGGAA AACGGATTGG CCTGTATTTC TTATTAGTGG TGGCTCACTT
TTATTATTTG TAATTGCGGT TTTTTTTAAT AAAAGTTACG TAGAGGGAGT CATTAATAGC
AGTTTTGCAG CTTCAATTAA ATATTTTGGT GCCTTTTGGC AGGTTTTATT AATCGGTACA
TTTATTGTTG CAATGTGTAT GGCGTTCTCA AAGTATGGGA GAGTTAAACT TGGGGGATTA
GAAAAACCTG AGATTAGTAC GACGAAATGG CTCGCTATTA TAATGTCTAC ATTACTGGCC
GGAGGTGGTG TTTTCTGGGC AGCGGCAGAG CCGATGTACC ATTTAATGAC GGTGCCACCA
ATACATGAAG GTATAACTGC TGGAACGAAA GAAGCAGTAA TGCCTGCTTT AGCACAAAGT
TATATGCACT GGGGTTTCTT GGCTTGGACG ATTTTAGGGA CAATTAGTGC GGTAGTTATG
ATGTATGGGC ATTATCATAA AGGGATGCCG TTAAAACCTC GAACGCTTTT ATATCCTATT
TTTGGAGAGA AATTGCGAAA GAGTTGGCTT GGAACACTAA TTGATGCATT TGCCATTATT
GCAGTAGCTG CAGGGACGAT TGGTCCAATC GGATTTTTAG GTCTACAAGC AAGTTATGGC
CTACAAGCAT TGTTTAACAT CCCGGATGTG TTTACAACTC AATTAGCCAT TATTGTTTGT
GTAGTAGCTG TTTCTACTAT ATCTGCGGTG ACTGGTATTG ATAAAGGGAT TCAAATTATA
AGTAATTTAA ATGTTAGATT GGCAATTTTA TTAATGGTAT TCGTATTACT ATTTGGACCA
GGTGGATTTA TTATTGATTC GTTTGTATCT TCGTTTGGAT TTTATATAAA TGAATTTATT
CCAATGAGCA CATACCGCGG TGATACAGGT TGGTTAGGAT CGTGGACAAT CTTTTTCTGG
GGATGGTTTA TTGGATATGG ACCGATGATG GCAATTTTAG TGAGCCGCAT TTCAAGAGGA
AGAACAATTC GAGAAATCAT CGTTGCAATT GGAATTATTG CACCTATTAT TACAACGTTT
TGGTTTACTA TACTAGGGGG ATCAGGTGTG TTTTATGAGT TAATGAATCC TGGTTCTATA
TCGACCGCAT TAAGTGCATC TGGTATGCCG GCAGCTATGA TTGCAATTAC AGAGCAACTG
CCACTTTCTC ATATTATTGG ACCTGCATTT CTTTTATTAA CAATTTTATT TGTAGTGACA
ACAGGAGATT CAATGGCGTA TTCGATTTCA ATGGCAGTAA CTGGAGATGG CGATCCTAGA
ATTAGTTTGC GAGTTTTTTG GTCGCTTATT ATGGGAACCG TTGCAGCGAT TCTTTTATAT
ATGGGTGAGG GTAGTATTAA TGCATTGCAA TCATTCATCG TAGTAACAGC TGTCCCAGTA
TCAATTTTGT TATTCCCAAT GCTATGGCTA GCCCCTAAAG TCGCAGGGGA ATTAGCACTA
AAACAAGGGA TTGTAAAAGA AGAAGATAAA ACGGCTTTCT TATTTCAAAA GGCTAGTAAA
TCAAAATAA
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| Protein sequence | MRMKSRKTDW PVFLISGGSL LLFVIAVFFN KSYVEGVINS SFAASIKYFG AFWQVLLIGT
FIVAMCMAFS KYGRVKLGGL EKPEISTTKW LAIIMSTLLA GGGVFWAAAE PMYHLMTVPP
IHEGITAGTK EAVMPALAQS YMHWGFLAWT ILGTISAVVM MYGHYHKGMP LKPRTLLYPI
FGEKLRKSWL GTLIDAFAII AVAAGTIGPI GFLGLQASYG LQALFNIPDV FTTQLAIIVC
VVAVSTISAV TGIDKGIQII SNLNVRLAIL LMVFVLLFGP GGFIIDSFVS SFGFYINEFI
PMSTYRGDTG WLGSWTIFFW GWFIGYGPMM AILVSRISRG RTIREIIVAI GIIAPIITTF
WFTILGGSGV FYELMNPGSI STALSASGMP AAMIAITEQL PLSHIIGPAF LLLTILFVVT
TGDSMAYSIS MAVTGDGDPR ISLRVFWSLI MGTVAAILLY MGEGSINALQ SFIVVTAVPV
SILLFPMLWL APKVAGELAL KQGIVKEEDK TAFLFQKASK SK
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