| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BT9727_4881 |
|---|
| Symbol | pdaA |
|---|
| ID | 2855567 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus thuringiensis serovar konkukian str. 97-27 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_005957 |
|---|
| Strand | + |
|---|
| Start bp | 4928638 |
|---|
| End bp | 4929375 |
|---|
| Gene Length | 738 bp |
|---|
| Protein Length | 245 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 637516316 |
|---|
| Product | polysaccharide deacetylase |
|---|
| Protein accession | YP_039190 |
|---|
| Protein GI | 49481163 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 75 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCAAGC GAGTATTTCA ATACATTATT TTATTTTTAA CGATTACTAT GTACGCGTCA
CCTCATGCAG GAGCAACTAC TATTCCCCCT GCTGAACATC ATCCAAATAC CGAACCTACT
TCTTCTACAA AAAAAATCGC GTACTTAACA TTTGATGACG GACCAAACAA ATATACTACG
CAAATTTTAA ACATCTTAAA AGAAAAGAAT GGAAAAGCAA CTTTCTTTGT TATTGGTGGA
AAAGTACCAC ATTATAAAAA GACAATGCAA CGATTAATTA AAGATGGACA CTATATTGGA
CTTCACAGTA TGTCACATGA TGTAAAACGC CTTTACACCG GTGATCCATC TGCTTTAATT
ACAGAAATGG AACAAACACA AAACATTGTC CAACAAGTTA CAAAAATAAA TACACATCTC
GTTCGTGTCC CGTACGGTAG CATGCCTTAT TTAAAAAAGA ATTACCGTGA TGCACTTGTA
TCAGCTCATT ATAAAATGTG GGATTGGACA ATCGATACAT ACGACTGGAA AAGCTATGAC
AATCCTTCTG CCATACTAGA AAGAGTACGT AATCAGAGCG ATGAACAAGT CGAAGTAATT
TTAATGCATG ATTCGAGTGT AACCGTACAA ATATTGCCGC AAGTAATTGA TTACTTACAG
TCACAAGGAT ACAAACTTCT TCCCTATAAT CCATCTTCTC ATCTCAAAGT AAACTTTTGG
AAAGACACAA GATTGTAA
|
|---|
| Protein sequence | MIKRVFQYII LFLTITMYAS PHAGATTIPP AEHHPNTEPT SSTKKIAYLT FDDGPNKYTT
QILNILKEKN GKATFFVIGG KVPHYKKTMQ RLIKDGHYIG LHSMSHDVKR LYTGDPSALI
TEMEQTQNIV QQVTKINTHL VRVPYGSMPY LKKNYRDALV SAHYKMWDWT IDTYDWKSYD
NPSAILERVR NQSDEQVEVI LMHDSSVTVQ ILPQVIDYLQ SQGYKLLPYN PSSHLKVNFW
KDTRL
|
|---|
| |