Gene BT9727_4821 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBT9727_4821 
SymbolsigL 
ID2854543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus thuringiensis serovar konkukian str. 97-27 
KingdomBacteria 
Replicon accessionNC_005957 
Strand
Start bp4871644 
End bp4872951 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content38% 
IMG OID637516255 
ProductRNA polymerase factor sigma-54 
Protein accessionYP_039130 
Protein GI49480372 
COG category[K] Transcription 
COG ID[COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog 
TIGRFAM ID[TIGR02395] RNA polymerase sigma-54 factor 


Plasmid Coverage information

Num covering plasmid clones100 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAGGCAA GTCTTTTACA AGAACAAAGC TTACGTTTGG CAATGACACA AGAGTTAAGG 
CAAGCGATTA CAATGCTCCA GTATAATGTA CAAGAATTAT CGGAGTTTTT GTATGAGCAA
TCGTTAGAGA ATCCCCTTAT TGAGTTAGGT GGTTTTGAGA GGGAGAAGAA AAAGAGCTCT
AACAACAGTA AAAGTACCAG CAAACAAGTC GAGAATCAGA TGGAAATCTA CAGTGTGGAT
TCAACAACGA TTCAGCAACA TTTATTAAAT CAAATACAGT ATTATAAAAT AGAGGAAGAA
GAGCGAAAAG TAGCTTCTTT CATTATTATG AACATGGATG GAAATGGGTA TTTACAAGAA
ACGAATGAAG AGTTAGCAAA TCTTCTTTCC GCACCACTGC ATGTAGTCGA CCGCTCTGTA
GAGCTTGTCC AATCACTCGA GCCAGCAGGG GTAGGGGCGC GTAATATTCA GGAATGTCTA
ACCTTACAAT TGAAGCGCTT ACAAAGACGG AATGGATTAG CGGAGGAGGT TATAGAGGAT
CACTTTGCTT ATTTCGTGAA GAAAGATTGG CGAAAGCTCG CTCAAGTGTT GAAGTGTAGT
AATGAAGAAT TGCAGGATGC GGTAAATTGT ATAACGTCAT TACAACCAAA ACCAGGTCTT
GCGTTTTCTT CTGATAAACC ACTTTATATT GTGCCTGATA TGGCGGTGAA AAAAGATGGC
GATCGTCTCG TTTTACAAAT GAACGAGAGA AATATGCCAA GAATTGAAAT TCATTCTGAA
TATAGTGCGC TTCTCAATAA TAGTGAAAGT GAAGTAGCAT CTTACGTATC AGAAAAGTAT
CAGCATGTGC AGTGGATTAT GCGTAGTTTA AAACAGAGAA AACAAACCCT TCTGCAAGTG
ATGACCATTA TTATGGAAAA ACAACGTGAT TTCTTCTGGA AAGGTCCGGA GTATTTAAAG
CCACTTGCTT TAAAAGAAGT AGCAGAAGAG TTAAGCGTGC ATGAATCGAC AATTAGTCGT
GCAACGCGAA ATAAATATGT GCAAACACCA CACGGTTTAT TTGAGATGAA ATCGTTCTTT
AGTAATGCCG TTTCGACTAC TGAAGATGAA GCAGTTTCTA CAAAGCGTGT AAAACAATTT
ATTCAAACGC TTGTTGAGGC AGAGAATAAG AAAAAGCCAC TTTCAGATCA AAAGATTTCA
AAATTGTTAG AAGAAGAGCA TGAAATCGTT ATTTCTCGAA GAACAGTGGC GAAGTATAGA
GAGCAAATGC ACATTCCAGC GTCGTCATTA CGAAAAACGA TCGGATAG
 
Protein sequence
MKASLLQEQS LRLAMTQELR QAITMLQYNV QELSEFLYEQ SLENPLIELG GFEREKKKSS 
NNSKSTSKQV ENQMEIYSVD STTIQQHLLN QIQYYKIEEE ERKVASFIIM NMDGNGYLQE
TNEELANLLS APLHVVDRSV ELVQSLEPAG VGARNIQECL TLQLKRLQRR NGLAEEVIED
HFAYFVKKDW RKLAQVLKCS NEELQDAVNC ITSLQPKPGL AFSSDKPLYI VPDMAVKKDG
DRLVLQMNER NMPRIEIHSE YSALLNNSES EVASYVSEKY QHVQWIMRSL KQRKQTLLQV
MTIIMEKQRD FFWKGPEYLK PLALKEVAEE LSVHESTISR ATRNKYVQTP HGLFEMKSFF
SNAVSTTEDE AVSTKRVKQF IQTLVEAENK KKPLSDQKIS KLLEEEHEIV ISRRTVAKYR
EQMHIPASSL RKTIG