Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BT9727_4821 |
Symbol | sigL |
ID | 2854543 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus thuringiensis serovar konkukian str. 97-27 |
Kingdom | Bacteria |
Replicon accession | NC_005957 |
Strand | - |
Start bp | 4871644 |
End bp | 4872951 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637516255 |
Product | RNA polymerase factor sigma-54 |
Protein accession | YP_039130 |
Protein GI | 49480372 |
COG category | [K] Transcription |
COG ID | [COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog |
TIGRFAM ID | [TIGR02395] RNA polymerase sigma-54 factor |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 100 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGAAGGCAA GTCTTTTACA AGAACAAAGC TTACGTTTGG CAATGACACA AGAGTTAAGG CAAGCGATTA CAATGCTCCA GTATAATGTA CAAGAATTAT CGGAGTTTTT GTATGAGCAA TCGTTAGAGA ATCCCCTTAT TGAGTTAGGT GGTTTTGAGA GGGAGAAGAA AAAGAGCTCT AACAACAGTA AAAGTACCAG CAAACAAGTC GAGAATCAGA TGGAAATCTA CAGTGTGGAT TCAACAACGA TTCAGCAACA TTTATTAAAT CAAATACAGT ATTATAAAAT AGAGGAAGAA GAGCGAAAAG TAGCTTCTTT CATTATTATG AACATGGATG GAAATGGGTA TTTACAAGAA ACGAATGAAG AGTTAGCAAA TCTTCTTTCC GCACCACTGC ATGTAGTCGA CCGCTCTGTA GAGCTTGTCC AATCACTCGA GCCAGCAGGG GTAGGGGCGC GTAATATTCA GGAATGTCTA ACCTTACAAT TGAAGCGCTT ACAAAGACGG AATGGATTAG CGGAGGAGGT TATAGAGGAT CACTTTGCTT ATTTCGTGAA GAAAGATTGG CGAAAGCTCG CTCAAGTGTT GAAGTGTAGT AATGAAGAAT TGCAGGATGC GGTAAATTGT ATAACGTCAT TACAACCAAA ACCAGGTCTT GCGTTTTCTT CTGATAAACC ACTTTATATT GTGCCTGATA TGGCGGTGAA AAAAGATGGC GATCGTCTCG TTTTACAAAT GAACGAGAGA AATATGCCAA GAATTGAAAT TCATTCTGAA TATAGTGCGC TTCTCAATAA TAGTGAAAGT GAAGTAGCAT CTTACGTATC AGAAAAGTAT CAGCATGTGC AGTGGATTAT GCGTAGTTTA AAACAGAGAA AACAAACCCT TCTGCAAGTG ATGACCATTA TTATGGAAAA ACAACGTGAT TTCTTCTGGA AAGGTCCGGA GTATTTAAAG CCACTTGCTT TAAAAGAAGT AGCAGAAGAG TTAAGCGTGC ATGAATCGAC AATTAGTCGT GCAACGCGAA ATAAATATGT GCAAACACCA CACGGTTTAT TTGAGATGAA ATCGTTCTTT AGTAATGCCG TTTCGACTAC TGAAGATGAA GCAGTTTCTA CAAAGCGTGT AAAACAATTT ATTCAAACGC TTGTTGAGGC AGAGAATAAG AAAAAGCCAC TTTCAGATCA AAAGATTTCA AAATTGTTAG AAGAAGAGCA TGAAATCGTT ATTTCTCGAA GAACAGTGGC GAAGTATAGA GAGCAAATGC ACATTCCAGC GTCGTCATTA CGAAAAACGA TCGGATAG
|
Protein sequence | MKASLLQEQS LRLAMTQELR QAITMLQYNV QELSEFLYEQ SLENPLIELG GFEREKKKSS NNSKSTSKQV ENQMEIYSVD STTIQQHLLN QIQYYKIEEE ERKVASFIIM NMDGNGYLQE TNEELANLLS APLHVVDRSV ELVQSLEPAG VGARNIQECL TLQLKRLQRR NGLAEEVIED HFAYFVKKDW RKLAQVLKCS NEELQDAVNC ITSLQPKPGL AFSSDKPLYI VPDMAVKKDG DRLVLQMNER NMPRIEIHSE YSALLNNSES EVASYVSEKY QHVQWIMRSL KQRKQTLLQV MTIIMEKQRD FFWKGPEYLK PLALKEVAEE LSVHESTISR ATRNKYVQTP HGLFEMKSFF SNAVSTTEDE AVSTKRVKQF IQTLVEAENK KKPLSDQKIS KLLEEEHEIV ISRRTVAKYR EQMHIPASSL RKTIG
|
| |