Gene BT9727_4766 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBT9727_4766 
SymbolnupC 
ID2857847 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus thuringiensis serovar konkukian str. 97-27 
KingdomBacteria 
Replicon accessionNC_005957 
Strand
Start bp4812812 
End bp4813993 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content35% 
IMG OID637516200 
ProductNupC family nucleoside transporter 
Protein accessionYP_039075 
Protein GI49478870 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1972] Nucleoside permease 
TIGRFAM ID[TIGR00804] nucleoside transporter 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value3.81544e-18 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAG TAATGTTTCT AGTCGGTTTA CTTGTAGTAT TTGTACTAGG GTTCCTTATC 
AGTTCAGATC GCAAGAAAAT TAAATATAAA CCAATTGCAC TTATGCTTGT CATTCAATTG
GTACTTGCGT ATTTCTTACT AAATACAAAG GTCGGATTTG TATTAGTAAA AGGGATTGCA
GATGGGTTTG GCGCTATTTT AAAATTTGCG GAAGCAGGGG TTAATTTCGT ATTTGGTGGT
CTAGCAAATG ATGGACAAGC ACCATTCTTC TTAACAGTAT TATTACCAAT TATTTTCTTA
GCAGTACTAA TTGGGATTTT ACAACATATT AAAATTTTAC CGATTATCAT TCGTGCAGTC
GGTTTCCTAT TAAGCAAAGT TAACGGTTTA GGAAAACTAG AATCATATAA TGCGGTAGCA
GCTGCAATTG TTGGTCAAGG GGAAGTATTC ATTACAGTAA AAGATCAATT AAGCAAATTA
CCGAAAAATC GTTTATACAC ACTTTGTGCA TCTTCCATGT CAACAGTATC GATGTCAATC
GTCGGTTCGT ACATGAAAAT GATTGATCCA AAATATGTAG TAACAGCACT TGTACTAAAC
TTATTCAGTG GATTCATTAT CGTTCATATT ATTAATCCAT ATGACGTAAA AGAAGAAGAC
GACATTTTAG AATTACAAGA AGATAAAAAA CAAACATTCT TTGAAATGTT AGGCGAATAT
ATTATGCTTG GTTTCTCTAT CGCTGTAACA GTAGCGGCGA TGTTAATCGG TTTCGTAGCA
TTAATTACAG CAATTAACGG TGTATTCGAT TCAATTTTCG GAATCACATT CCAAAGCATT
TTAGGGTACA TTTTCTCACC ATTAGCATTC GTAATGGGTA TCCCAACATC AGAGATGCTA
ACAGCAGGAC AAATTATGGC AACGAAATTA GTAACGAACG AATTCGTTGC AATGCTTGAC
CTTGGTAAAG TAGCTGGCGA TTTATCAGCT CGTACAGTAG GTATTTTATC TATCTTCCTT
GTATCATTTG CGAACTTCTC ATCTATCGGG ATTATCGCAG GTGCAACGAA GAGTATCGAT
GGCAAACAAG CAAACGTTGT ATCATCATTC GGTTTAAAAC TTGTATACGG TGCAACGTTA
GTAAGTATAT TATCAGCGGT TATCGTTGGG GTTATGCTTT AA
 
Protein sequence
MKIVMFLVGL LVVFVLGFLI SSDRKKIKYK PIALMLVIQL VLAYFLLNTK VGFVLVKGIA 
DGFGAILKFA EAGVNFVFGG LANDGQAPFF LTVLLPIIFL AVLIGILQHI KILPIIIRAV
GFLLSKVNGL GKLESYNAVA AAIVGQGEVF ITVKDQLSKL PKNRLYTLCA SSMSTVSMSI
VGSYMKMIDP KYVVTALVLN LFSGFIIVHI INPYDVKEED DILELQEDKK QTFFEMLGEY
IMLGFSIAVT VAAMLIGFVA LITAINGVFD SIFGITFQSI LGYIFSPLAF VMGIPTSEML
TAGQIMATKL VTNEFVAMLD LGKVAGDLSA RTVGILSIFL VSFANFSSIG IIAGATKSID
GKQANVVSSF GLKLVYGATL VSILSAVIVG VML