| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BT9727_4728 |
|---|
| Symbol | |
|---|
| ID | 2855018 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus thuringiensis serovar konkukian str. 97-27 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_005957 |
|---|
| Strand | - |
|---|
| Start bp | 4778657 |
|---|
| End bp | 4779973 |
|---|
| Gene Length | 1317 bp |
|---|
| Protein Length | 438 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 637516163 |
|---|
| Product | amino acid permease |
|---|
| Protein accession | YP_039038 |
|---|
| Protein GI | 49481077 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0531] Amino acid transporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.000000000000742695 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATCATG ATGAGAAGAA CAAAATTGGT TTAACGGTAG CACTTTCTAT CGTAGTAGGA
ACGATTATTG GGTCTGGTGT GTTTATGAAA CCAGGGAGCG TATTAGATTA CTCGGGGAGT
TCTAATATGG CGATTCTTGC TTGGGTAATC GGTGGTCTGT TAACGTTAGC AAGTGGTTTA
ACAGTAGCTG AAATTGGAGC GCAAATCCCG AAAAATGGTG GGTTGTATAC GTATTTAGAG
GAGATTTACG GAAGTTTTTG GGGATATTTA TCAGGCTGGA TGCAAACGAT TGTTTATGGG
CCAGCTATTA TTGGAACATT AGGGTTATAC TTTAGTTCTT TAATGATTAA TTTTTTCTAT
TTAGATAAAG TATGGAATTT ACCAATCGCA ATTGGAACAG TTGTGTTCCT TGGCGTTGTA
AATAGTATGG GAACAAAATA CGGAGGTATC GTCCAAACGA TCACGACAAT CGGGAAGATG
ATTCCAATCG TATTAATTGT TGTGTTAGGT TTTTGGAAAG GGAATAGCGA TATCTTTAAC
GTAGTTGTGC CGATATCAGA AAATCAAAGT ATCGGGATGG CAATCTTAGC AACGTTATTT
GCTTATGACG GCTGGATTTT ACTTGCTTCG ATTGGTGGAG AAATGAAGAA TCCAACAAAG
TTATTACCGA AAGCTATGAC AGTTGGGATT TTAATTGTAA CAGCTGCTTA CGTATTAATT
AATTTGGCGT TACTGAATGT ATTACCAGCA ACACAAATTG TAGACCTTGG AGAAAATGCA
ACAGCGACAG CTGCAGGAAT GTTACTTGGA GAATATGGCG GGAAAATTAT TAGTATCGGT
ATTATCGTTT CTATTTTCGG TTGTTTAAAT GGAAAGATTT TAACGTTCCC ACGTATCCCG
ATGTCGATGG CAGAACGTGG ACAACTTCCA TTTGCTAAGT TTATTGCAAA GGAAAGCCCA
AGATTTAAAA CACCAGCAAA TGCGATTACT GTTGAAATCA TTTTAGGAAT TATTTTAATG
ATTATTAGTG ATCCAAATAA GCTATCTGAG ATTTCCGTAT TCATTATTTA TATTTTCTAC
GTAATGACGT TTATCGGTGT CTTCATTTTA AGAAAACGTA ATAAAAATAA AGAGCGTGCA
TACAGTGTAC CGTTATTCCC AATCGTCCCA ATCGTTGCGA TTTTCGGTTC ACTCTTTGTA
ATCGGTAGTG CGATTATTAA CGATCCACTA AGTTGTTTCT TATCAATTGG AATTGTCTTT
ACGGGACTGC CGGTATATTG GTATTTAAAT AAGAAGAACA AAACTGAAGT GTCATAA
|
|---|
| Protein sequence | MHHDEKNKIG LTVALSIVVG TIIGSGVFMK PGSVLDYSGS SNMAILAWVI GGLLTLASGL
TVAEIGAQIP KNGGLYTYLE EIYGSFWGYL SGWMQTIVYG PAIIGTLGLY FSSLMINFFY
LDKVWNLPIA IGTVVFLGVV NSMGTKYGGI VQTITTIGKM IPIVLIVVLG FWKGNSDIFN
VVVPISENQS IGMAILATLF AYDGWILLAS IGGEMKNPTK LLPKAMTVGI LIVTAAYVLI
NLALLNVLPA TQIVDLGENA TATAAGMLLG EYGGKIISIG IIVSIFGCLN GKILTFPRIP
MSMAERGQLP FAKFIAKESP RFKTPANAIT VEIILGIILM IISDPNKLSE ISVFIIYIFY
VMTFIGVFIL RKRNKNKERA YSVPLFPIVP IVAIFGSLFV IGSAIINDPL SCFLSIGIVF
TGLPVYWYLN KKNKTEVS
|
|---|
| |